Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1434 ATGAGAGTTGAACTCTCTGCGGGACCTCGGACCGTCGTCGTCTCGCATTCCTTCCTAAAACCCTTTCAAAAACCTAACTTCAATAGCACAATACCGCCCTTCACTTCACTCAATGGATCTCTACTCTTCAGACGCCTCACCCAATTTTCCCATCAACCCAACGCTCCTCCTCTCTTACCTTCTCACTCCGATACCGGTCTCCTTTTCCGGGAAAAAGTTGTCTACCTTGAGAAACTCAACGTCAACTCCAGCAAAGCTCTCCGGCAAAATCCTGACATCCGGTCGGTTCCGATTTCGTCTCTTAAATCTGTACAAGACTGCCTCTCCTCAATGGGCGTGGAGCGCTCTGCAATGGGTCGAATCCTCGATATGTATCCCCAGCTTCTCACATGCGACCCCTATTCTGATATCTATCCTATTTTCGATTTCTTATTGAATGAAGTTGCAATCCCGTTCCCTGATATTCGGAAAGCGATAATACGGTGCCCGAGGCTATTGGTTTGCAATGTGGATGAGCAACTCAGACCGACACTGGGCTTCTTGAGGAATTTAGGGTTTGTGGGACCCAGTTCCATCAATTACCAGACCGCATTGCTGCTGGTGTCAAGTGTGGAGGGTACCCTTACGCCCAAAATTGAGTATTTACAGAGTCTGGGGTTTTCTTATGAGGAAGTGGTTAATATGGTTATAAGGTCACCTGGATTGTTGACGTTTAGTATAAAGAACAATTTGATGCCAAAATTTGAGTATTTTTTGGAGGAGATGAATGGCGACATAGCTGAATTGAAGAGATTTCCACAGTATTTTTCATTTAGTTTGGAGAAGAAGATTAAGCCAAGGCATAGACTATTACTCAAGCACGGCTTTACGCTTCCTTTGGCCGAGATGTTAAAGGTTAGTGATGGCGAGTTCGGTGTTACGTTAGTTGAAATGCGACTACAGTCACTTGAGGCAAGGTAG 960 0.4542 MRVELSAGPRTVVVSHSFLKPFQKPNFNSTIPPFTSLNGSLLFRRLTQFSHQPNAPPLLPSHSDTGLLFREKVVYLEKLNVNSSKALRQNPDIRSVPISSLKSVQDCLSSMGVERSAMGRILDMYPQLLTCDPYSDIYPIFDFLLNEVAIPFPDIRKAIIRCPRLLVCNVDEQLRPTLGFLRNLGFVGPSSINYQTALLLVSSVEGTLTPKIEYLQSLGFSYEEVVNMVIRSPGLLTFSIKNNLMPKFEYFLEEMNGDIAELKRFPQYFSFSLEKKIKPRHRLLLKHGFTLPLAEMLKVSDGEFGVTLVEMRLQSLEAR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1434 319 Gene3D Transcription termination factor 3, mitochondrial 98 318 IPR038538 -
Prci5g1434 319 Pfam mTERF 75 186 IPR003690 GO:0003690|GO:0006355
Prci5g1434 319 Pfam mTERF 154 304 IPR003690 GO:0003690|GO:0006355
Prci5g1434 319 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Prci5g1434 319 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
Prci5g1434 319 SMART mt_12 119 151 IPR003690 GO:0003690|GO:0006355
Prci5g1434 319 SMART mt_12 190 221 IPR003690 GO:0003690|GO:0006355
Prci5g1434 319 SMART mt_12 226 258 IPR003690 GO:0003690|GO:0006355
Prci5g1434 319 SMART mt_12 156 187 IPR003690 GO:0003690|GO:0006355
Prci5g1434 319 PANTHER CGI-12 PROTEIN-RELATED 78 304 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1434 Prci-Chr5 33584722 33585873 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci5g1434 mTERF 8.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1434 K15031 - qsa:O6P43_032999 413.305