Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1406 ATGAGCTCCGACACGTCCACTGGCGGCGGTTCTTCCAGCGGTTCTTCATCGGCGGCGGGCAGGGACAAGAAGAGGGGGAAGGCTAAAGTGAGTCGCACTTCAATGATACTATGGCATTCGCACCAAAACGATGCCGTCGCTGTCCGGAAGCTTCTGGAGGAAGATCCGTCGCTTGTGAAGGCCAGAGACTACGATAATCGCACTCCACTTCATGTGGCTTCCCTCCATGGTTGGATTGACGTTGCTAAGTGCTTGATTGAATTTGGCGCCGACGTTAACGCTCAGGATCGTTGGAGAAACACTCCTCTAGCTGATGCAGAAGGGGCTAAAAAGTATAGCATGATGGAGCTTTTTAAATCTTATGGAGGCTTGTCTTATGGCCAAAGTGGCAGCCACACTGAACAGAAGCCCGTTGCACCCCCATTGCCTAACAAGTGTGATTGGGAAGTCGACCCTACTGAGCTGGACTTCTCGCATTCAGTTCGTATTGGGAAGGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGGACGCCAGTTGCTGTTAAACGCATTCTTCCATCTCTTTCAGATGATAAATTGGTGATGTAA 594 0.5017 MSSDTSTGGGSSSGSSSAAGRDKKRGKAKVSRTSMILWHSHQNDAVAVRKLLEEDPSLVKARDYDNRTPLHVASLHGWIDVAKCLIEFGADVNAQDRWRNTPLADAEGAKKYSMMELFKSYGGLSYGQSGSHTEQKPVAPPLPNKCDWEVDPTELDFSHSVRIGKGSFGEILKAHWRGTPVAVKRILPSLSDDKLVM 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1406 197 PANTHER ANKYRIN REPEAT FAMILY A 48 143 - -
Prci5g1406 197 Pfam Ankyrin repeats (many copies) 51 103 IPR002110 GO:0005515
Prci5g1406 197 SUPERFAMILY Ankyrin repeat 36 122 IPR036770 -
Prci5g1406 197 SMART ANK_2a 65 94 IPR002110 GO:0005515
Prci5g1406 197 MobiDBLite consensus disorder prediction 1 32 - -
Prci5g1406 197 Gene3D Phosphorylase Kinase; domain 1 140 195 - -
Prci5g1406 197 MobiDBLite consensus disorder prediction 1 19 - -
Prci5g1406 197 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Prci5g1406 197 ProSitePatterns Protein kinases ATP-binding region signature. 163 184 IPR017441 GO:0005524
Prci5g1406 197 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Prci5g1406 197 FunFam serine/threonine-protein kinase STY46-like 150 197 - -
Prci5g1406 197 Gene3D - 7 129 IPR036770 -
Prci5g1406 197 SUPERFAMILY Protein kinase-like (PK-like) 156 190 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1406 Prci-Chr5 33194627 33197631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1406 1 197 MAP Kinase Kinase Kinase AT1G14000 73.039 3.27e-99 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1406 - - qsa:O6P43_025503 321.242