Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1405 ATGAGCTCCGACACGTCCACTGGCGGCGGTTCTTCCAGCGGTTCTTCATCGGCGGCGGGCAGGGACAAGAAGAGGGGGAAGGCTAAAGTGAGTCGCACTTCAATGATACTATGGCATTCGCACCAAAACGATGCCGTCGCTGTCCGGAAGCTTCTGGAGGAAGATCCGTCGCTTGTGAAGGCCAGAGACTACGATAATCGCACTCCACTTCATGTGGCTTCCCTCCATGGTTGGATTGACGTTGCTAAGTGCTTGATTGAATTTGGCGCCGACGTTAACGCTCAGGATCGTTGGAGAAACACTGGCCAAAGTGGCAGCCACACTGAACAGAAGCCCGTTGCACCCCCATTGCCTAACAAGTGTGATTGGGAAGTCGACCCTACTGAGCTGGACTTCTCGCATTCAGTTCGTATTGGGAAGGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGGACGCCAGTTGCTGTTAAACGCATTCTTCCATCTCTTTCAGATGATAAATTGGTGATGTAA 519 0.5164 MSSDTSTGGGSSSGSSSAAGRDKKRGKAKVSRTSMILWHSHQNDAVAVRKLLEEDPSLVKARDYDNRTPLHVASLHGWIDVAKCLIEFGADVNAQDRWRNTGQSGSHTEQKPVAPPLPNKCDWEVDPTELDFSHSVRIGKGSFGEILKAHWRGTPVAVKRILPSLSDDKLVM 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1405 172 SMART ANK_2a 65 94 IPR002110 GO:0005515
Prci5g1405 172 MobiDBLite consensus disorder prediction 1 32 - -
Prci5g1405 172 FunFam serine/threonine-protein kinase STY46-like 125 172 - -
Prci5g1405 172 Gene3D - 7 107 IPR036770 -
Prci5g1405 172 Gene3D Phosphorylase Kinase; domain 1 114 170 - -
Prci5g1405 172 MobiDBLite consensus disorder prediction 1 19 - -
Prci5g1405 172 ProSitePatterns Protein kinases ATP-binding region signature. 138 159 IPR017441 GO:0005524
Prci5g1405 172 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Prci5g1405 172 Pfam Ankyrin repeats (3 copies) 39 96 IPR002110 GO:0005515
Prci5g1405 172 SUPERFAMILY Protein kinase-like (PK-like) 131 165 IPR011009 -
Prci5g1405 172 SUPERFAMILY Ankyrin repeat 35 101 IPR036770 -
Prci5g1405 172 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Prci5g1405 172 MobiDBLite consensus disorder prediction 97 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1405 Prci-Chr5 33194622 33197631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1405 1 172 MAP Kinase Kinase Kinase AT1G14000 63.725 3.55e-79 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1405 - - gmx:100793237 275.018