Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1391 ATGGGTGGAATTGGTGAGCAACCACCACCGTCTTCGTCGGCGCCGGCCAAGATAGGACCTCCACCTCCACCTCAGCCAAGCACTTCGATGGACACGCTTTTCAATGGTGGGTCCTCTGGCGGCTCCGGCTTCGGGTTTAGTCCTGGTCCGATGACTCTCGTCTCGAATTTCTTCAACGAGAACGACGACTTCAAGTCCTTCTCGCAGCTTCTCACCGGCGCTATGCCGTCTCCATTGTTGACGGAGCAGGATAGGCCTTCCGTTGAGCAGCCGCCGATGCTGGCAGTTTCGCCAGGGTTGAGCCCATCTGGCTTCCTCGATCCCCCCAGGCTTTTTTCGGCTTCTCAGGTCTCAGGCCAGGGTATGCAGGTCAACGAAAATTCATCTTCTTTTACTTCCATTGCCAAACGAGTTCAGACGATGCCACCAAGCGCATCATCAATCGCAGATTCTGGGACGTCGTCTTTATCAATGAAGGAATGTCCCGACGATGGATTCAACTGGCGCAAGTATGGGCAGAAACAGGTGAAAGGAAGTGAGTTCCCTCGAAGTTATTACAAGTGCACGCATCCAAATTGCCCCGTCAAGAAGAAGGTTGAGAAATCCATCGACGATGACCACGTTGTCGCCATCATTTACAAAGGACAACACAATCATCAACCTCTTCGGCTCACCAGCAGCAGCAACAAGCACGCAAAAGACACAGCATTAGCAGCAGCTTCGAATGTCGAGAGTTTTAACGCGCGAGGAACAACCCGGAGGGAGTCAACAGCGCCCGAACATGTGGCAGAAGGATCAAGTGATGACAGTGAGGAAGCAGCAGGTTATCGCGATACTGATGAAGTGGAGGAGAAAAATGACGAGCCTGACCCAAAGAGGAGGAGAAATACAGAAGCAATGGTGCATGAGGCAGTGTCTTCGCATAGGACAGCCATGGAACCTAGGATCATTGTGCAGACAACAAGTGAAGTAGACCTGCTTGACGATGGGTATAGATGGCGAAAATATGGCCAAAAAGTTGTCAAAGGCAACCCTTTCCCAAGGAGCTACTACAAGTGCACCACCACAGGTTGCAATGTTCGGAAACATGTCGAGAGGGCATCCTCGGATCCTAAAGCTGTCATTACAACATATGAAGGAAAACACAACCACAACGTGCCAGCAGCTAAAAGCAACAGCCACACTATTGCCAACAACCCAGCATCACAGCTTAGACCCCACAATACCACAATACCAGAGAGAATTAGTTTCATTAATGGTGGAGGTATTGGTGGGGCCAATCAGCAGCAACAGCCTGTGGCACGTCTTAGGTTGAAGAATGAACAGATAACCTAG 1335 0.5071 MGGIGEQPPPSSSAPAKIGPPPPPQPSTSMDTLFNGGSSGGSGFGFSPGPMTLVSNFFNENDDFKSFSQLLTGAMPSPLLTEQDRPSVEQPPMLAVSPGLSPSGFLDPPRLFSASQVSGQGMQVNENSSSFTSIAKRVQTMPPSASSIADSGTSSLSMKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVEKSIDDDHVVAIIYKGQHNHQPLRLTSSSNKHAKDTALAAASNVESFNARGTTRRESTAPEHVAEGSSDDSEEAAGYRDTDEVEEKNDEPDPKRRRNTEAMVHEAVSSHRTAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPFPRSYYKCTTTGCNVRKHVERASSDPKAVITTYEGKHNHNVPAAKSNSHTIANNPASQLRPHNTTIPERISFINGGGIGGANQQQQPVARLRLKNEQIT 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1391 444 SUPERFAMILY WRKY DNA-binding domain 161 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci5g1391 444 FunFam WRKY transcription factor 33 314 380 - -
Prci5g1391 444 MobiDBLite consensus disorder prediction 77 128 - -
Prci5g1391 444 ProSiteProfiles WRKY domain profile. 322 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci5g1391 444 MobiDBLite consensus disorder prediction 254 300 - -
Prci5g1391 444 Gene3D WRKY domain 147 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci5g1391 444 Gene3D WRKY domain 312 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci5g1391 444 MobiDBLite consensus disorder prediction 1 51 - -
Prci5g1391 444 Pfam WRKY DNA -binding domain 328 384 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci5g1391 444 Pfam WRKY DNA -binding domain 163 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci5g1391 444 SUPERFAMILY WRKY DNA-binding domain 319 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci5g1391 444 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci5g1391 444 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 241 408 IPR044810 GO:0003700
Prci5g1391 444 FunFam WRKY transcription factor 150 222 - -
Prci5g1391 444 MobiDBLite consensus disorder prediction 13 28 - -
Prci5g1391 444 MobiDBLite consensus disorder prediction 230 253 - -
Prci5g1391 444 MobiDBLite consensus disorder prediction 113 128 - -
Prci5g1391 444 MobiDBLite consensus disorder prediction 230 300 - -
Prci5g1391 444 SMART WRKY_cls 327 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci5g1391 444 SMART WRKY_cls 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1391 Prci-Chr5 33108416 33112551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1391 23 444 WRKY Transcription Factor Family AT2G03340 44.338 8.74e-120 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci5g1391 WRKY 4.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1391 - - jre:109002894 414.075