Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1366 ATGTTTGGCCTTAGAAGAACACCTCCCAAGGTTGCTACAGGATTTCAAGCTTCTTCCAGTTCTAACCCTTTTGATTCAGATTCAGAACCACTTGATAAATCAAACCAAAAGCCAGCAAGACGAACTGCATCAGAATCTGCCCACAAAGTACCTATTTCTAAAAGAAACCCTTTTGATGATGAAGATGAAGAAGATTTTTGGGGAAGAGGAAATTCATCCACTTCATCATCATTATCACACTCATCTTCTGCAAAAACAAGATACAAAAGCAAGTTAGAGGCGCAGAGTGTTGAGGAGTTGGAAAATTATGCTGTGAACAAGGCAGAAGAGACAACAAAGAACGTGAAGAATTGCCTGAAGATAGCTGAGGACATAAGAGAAGAAGCCACAAGGACCCTTGAGATGTTGCACCTACAGGGTGACCAAATAACAAGGACTCACAATATGATAGTTGATACAGACAAGGATTTGACTAAGGGTGAGAAACTATTAAACAGTCTTGGGGGTATCTTCTCTAAGTCATGGAAACCGAAGAAGACTAGAAACATTCAAGGCCCTGTGACAATCGCACCAGATATTTTATCCAAGAAAGGTGAGGAGAATATGGATAAGAGGGAATGGTTAGGCTTAGCTGCTCTGCCTAAAAGAAAGTCAGCTTCAAAAACAGTTCATGATGATGCAGCAAATGCACATCAGAAAGCTGATGTTGAGAAGGCGAAACAAGATGAGGCACTTTCTGATCTGAGCAATGTCTTGGTCAATTTGAAGAGTATGGCAGTTGACATGGGAACTGAAATAGACAGGCAAAATAAAGCTATGGATCATCTCAATTTGGATGTGGATGAGATGAACTCACGAGTTAAAGGTGCTAACCTGCGTGCACGCAAATTAATAGGCTAA 900 0.4078 MFGLRRTPPKVATGFQASSSSNPFDSDSEPLDKSNQKPARRTASESAHKVPISKRNPFDDEDEEDFWGRGNSSTSSSLSHSSSAKTRYKSKLEAQSVEELENYAVNKAEETTKNVKNCLKIAEDIREEATRTLEMLHLQGDQITRTHNMIVDTDKDLTKGEKLLNSLGGIFSKSWKPKKTRNIQGPVTIAPDILSKKGEENMDKREWLGLAALPKRKSASKTVHDDAANAHQKADVEKAKQDEALSDLSNVLVNLKSMAVDMGTEIDRQNKAMDHLNLDVDEMNSRVKGANLRARKLIG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1366 299 Coils Coil 266 286 - -
Prci5g1366 299 MobiDBLite consensus disorder prediction 69 90 - -
Prci5g1366 299 MobiDBLite consensus disorder prediction 1 91 - -
Prci5g1366 299 FunFam SNAP25 homologous protein SNAP33 232 299 - -
Prci5g1366 299 Gene3D - 89 169 - -
Prci5g1366 299 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 235 297 IPR000727 -
Prci5g1366 299 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 21 298 - -
Prci5g1366 299 MobiDBLite consensus disorder prediction 12 29 - -
Prci5g1366 299 SMART tSNARE_6 100 167 IPR000727 -
Prci5g1366 299 SMART tSNARE_6 230 297 IPR000727 -
Prci5g1366 299 SUPERFAMILY SNARE fusion complex 229 298 - -
Prci5g1366 299 Gene3D - 234 299 - -
Prci5g1366 299 FunFam SNAP25 homologous protein SNAP33 91 168 - -
Prci5g1366 299 CDD SNARE_Qc 238 296 - -
Prci5g1366 299 MobiDBLite consensus disorder prediction 30 62 - -
Prci5g1366 299 CDD SNARE_SNAP25N_23N_29N_SEC9N 102 166 IPR044766 GO:0005484|GO:0031201
Prci5g1366 299 SUPERFAMILY SNARE fusion complex 95 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1366 Prci-Chr5 32891506 32894015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1366 225 295 SNARE and Associated Proteins AT3G09740 35.211 7.83e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1366 K18211 - qsu:111990923 326.25