Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1359 ATGGGATTTAAACGGTGTTTTGAGGCCAATGATTTTGAGGATCTTCCTTGCAACAAGGCAAAACGTTTGGAATGCATTGATAAGCTGGTTTCATTTGCTGATGCGGATACTCTCAATAATGGTCCAGTGAAGCCTATTGCTTCAGGGAAAGATGAGGATGGCTTTTACAATATTCAGTGGTATGATGCGGTTGAACCAGAGACTCTCACTGGAGCTGCACATGCTGGTGAGAAGGATATTGAGACCGGTGGCAATTTCAGCAGCAGTTATGGTGAGGATGGTTCTGGCTCTGGGGGAACATCATTGTGTGCTTCTTTAGATTCCTTCGAATTTGATTTTCCACAGAAAGCAAGTGTTCCTTTGGATGATGCCTATTCAGTTCCCAATAGTTTCCCAAGAAGACAAGTTCCTGTTGGACCAAATCATCAAGCCACCATTCCAGTCTGGAAGGGAAGAGGGAATGGGATATCAGGGTCAACAGGCACCTATAATGTTTATGGCTATGAAGAGAAGTTGATGGGGACTGCTGTGATCTCAATGCCCAACCCGAGCTTCTATTCTTGTGAGAGTGACGGGGATGAAGAAGGCAGAACAGAATGCAACTGCGTGGATAAGGATTCCATCAGATGTGTTCAACAGCACGTTCGGGAAGCACGTGAAAAGTTGATGAAGACTGTTGGAAATGAAACGTTTGTGAACCTGGGGTTTGGTCACATGGGAGAGGAGGTTGCACTGAAATGGAGTGAAGAAGAAGAAGATTTATTTCATGAAATTGTATACACGAATCCTGCAACATTGGGTAGAAACTTTTGGAAGCAGCTGTCAGCTGCATTCCCTTCTCGAACAAAGAAGGAAATTGTCAGCTATTATTACAATGTGTTTATTCTTCGGAGAAGGGCTGCTCAGAACAGATCCAGATTTCTTAATATTGACAGTGATGATGATGAATGTCCACCAAGCAATAATGTGGGCTTCTATGGTTTCGAAGTTTCAGAAGAAGACGACTCTGCTATTGAGTCTCCTGATGATCAAGATGTCCATGTTGGAAACCAAGTTAATTATTCTGATGATGATGGTGAAGATGATAACAGTGACAACGGAACTGATGGTGATATCACTGGTATCAGTGGGTATCACCAGGGAAACAGCACTGACTCCAGCTCACAGGTTGAGAGCTTGTCTGAACCTGTTCAACAAGTCAATGAGACTCTGGGGATATCAATTGGTTCAGGTGTTCAGGATGATTCCTGCACGTCCTTTGAGTGTCAGATCAATATGGACGAGTCCTTCCCCTCATGTGGTCATGAAGATGCTAGTTCTGCTTTGCAAGCTAGTGGATTTAAATGTGATCAGAGCCCACTCATGCCAGGTATACTTGATTTCTCCAGTGACACCATGGAGCGTGTTTATTTCTCAGAGCCTTGTGATGCTAACGATTGGTACCCAGGGTACTCCACCGGTCCGTCCTCTGATATTGACTTCTCGGCCACATCCAAATTAATTGAAGAGTTTTTGGGTCAAGTTACTCCAGATCGAAGGACCAAAAATGACTGA 1554 0.4402 MGFKRCFEANDFEDLPCNKAKRLECIDKLVSFADADTLNNGPVKPIASGKDEDGFYNIQWYDAVEPETLTGAAHAGEKDIETGGNFSSSYGEDGSGSGGTSLCASLDSFEFDFPQKASVPLDDAYSVPNSFPRRQVPVGPNHQATIPVWKGRGNGISGSTGTYNVYGYEEKLMGTAVISMPNPSFYSCESDGDEEGRTECNCVDKDSIRCVQQHVREAREKLMKTVGNETFVNLGFGHMGEEVALKWSEEEEDLFHEIVYTNPATLGRNFWKQLSAAFPSRTKKEIVSYYYNVFILRRRAAQNRSRFLNIDSDDDECPPSNNVGFYGFEVSEEDDSAIESPDDQDVHVGNQVNYSDDDGEDDNSDNGTDGDITGISGYHQGNSTDSSSQVESLSEPVQQVNETLGISIGSGVQDDSCTSFECQINMDESFPSCGHEDASSALQASGFKCDQSPLMPGILDFSSDTMERVYFSEPCDANDWYPGYSTGPSSDIDFSATSKLIEEFLGQVTPDRRTKND 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1359 517 Gene3D - 246 297 - -
Prci5g1359 517 MobiDBLite consensus disorder prediction 368 396 - -
Prci5g1359 517 PANTHER DNA BINDING PROTEIN 1 509 - -
Prci5g1359 517 CDD SANT 246 294 IPR001005 -
Prci5g1359 517 SMART sant 243 296 IPR001005 -
Prci5g1359 517 MobiDBLite consensus disorder prediction 333 396 - -
Prci5g1359 517 ProSiteProfiles Myb-like domain profile. 246 294 IPR001005 -
Prci5g1359 517 Pfam Myb-like DNA-binding domain 246 293 IPR001005 -
Prci5g1359 517 SUPERFAMILY Homeodomain-like 246 295 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1359 Prci-Chr5 32842544 32845873 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci5g1359 Myb_DNA-binding 6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1359 - - pcin:129311877 1037.33