Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1341 ATGGCGAGAAAAGTGCCGTGCTTGCTTACACATAGACGCTCCTCCTCCTCCACCCCTGAGATTCCATCCCTTTACTCCTTCCTTCAACCTTCTATCTTTGCCCTTAAAAGGAACCCTTCAGTTTCTCCAGAACCCACCAAGCTCCCAACCTCACCACCTCGTTCCCTCACTCCTGAACAAATAACCACCCTGCAAAATACTCTTCACAAGTCTCTTATCAGCAGTGACACAGATGAGGCATGGAGGTCTTTCAAGACTCTCACAAACAACTCTGCCTTCCCAAGTAAGTCAATCACCAATTCCCTCATCGCCCACTTGTCCTCACATGGTGACATTCATAATCTCAAGAGGTCTTTTGCATCTGTAGTATACATCATAGAGAAGAACCCTAAAATATTAGATTTTCAAACAGTTCATGCCATGCTTGATTCTATGAAATGTGCCAATCTTGCCGCCCCTGCTTTTGCCCTTGTTAAATGCATGTTCAAGAACAGGTTTTTTGTTCCATTTAGTGTCTGGGGCAGTGTGCTTGTTGAAATTAGTCGGAAGAACAGTAACCTTGCTGCTTTTTTACGCCTTTTTGAAGAGAATTGTAGGATTGCTTTGGATGAGAAATTGGATTTCATGAAACCTGACCTGGCTGCTTGTAATGCAGCACTGGAAGGGTCTTGTCGTGACCTTGAATCAGTGAGTGATGCTGAAAAAGTTGTTGAAACAATGACAGTTTTGGGTGTTAGACCAGATGAATCCAGTTTTGGATTTCTTGCTTATTTGTATTCATTGAAGGGGCTTGCACAAAAAATAGATGAGTTAAAATTTTTAATGAGTGGCTTTGGTTTCTCAAACAAAAAGGAATTCTATTGTAATTTAATACAAGGGTATGTTAAGTCAGGCAAGTTAGCATCAGTTGAGCTAACGATTCTTCAAAGTTTGAAAGATAGAGATGACAAAAGTTGGAATTTTGGAGAAGAAACTTACTGTGAAGTAGTTAAGGGATATCTTCAAAATGGACATATCAAGGGATTAGCAAATTTAATTATTGAAGCTCAGAAGTTAGAGCCTTCAAATACCGTAGATAAATCTATAGGTTATGGTATTGTTAGTGCATGTGTTAACAGTGGATTATCAAACAAGGCACACAGCGTTCTTGATGAAATGAATGCCCTTGGAGGCTCTGTTGGTCTCGGGGTCTATGTGCCAATCTTAAAAGCTTACTGCAAAGAAAATCGGACTGCTGAAGCTACTCAATTAGTCATGGAGATTAGTAATTCAGGTCTAAAATTGGATGTGGAAACCTATGATGCTCTAATAGATTCATCCATGTCCAGCCAAGATTTTCAGTCTGCTTTTACATTATTTAGGGATATGAGGGAGGCAAGAATTTCTGATTTGAAGGGGAGCTACCTAACTATAATGACAGGTTTGATGGAAAACCATCGACCTGAGTTGATGGCAGCTTTCTTAGATGAGGTGGCTGAGGACCCTCGAATTGAAGTTGGTACTCATGACTGGAATTCTATCATTCATGCTTTCTGTAAAGCTGGGAGACTAGAAGATGCTAGAAGGACATTTAGAAGGATGGTATTCCTGCAATTTGAGCCAAATGATCAGACATATCTGTCCCTAATTAATGGGTATGTCTTGGCAGAGAAATATTTTAATGTTCTAATGTTGTGGAATGAGGTAAAGCGAAAGTTATCAGCGGATGGACAGAAGGGGATCAAATTTGAACACAGCCTTGTTGATGCTTTCTTGTATGCTATGGTGAAGGGAGGTTTCTTTGATGCGGTTATGCAAGTTGTGGGGAAATCTAATGAGATGAAGATTTTTGTTGATAAGTGGAGATACAAGCAAGCATTCATGGAGACTCATAAGAAACTCAAAGTGTCAAAGTTAAGAAGAAGAAACTTCAGGAAAATGGAAGCACTCATTGCTTTTAAGAACTGGGCTGGCTTAAATGCATGA 1965 0.4 MARKVPCLLTHRRSSSSTPEIPSLYSFLQPSIFALKRNPSVSPEPTKLPTSPPRSLTPEQITTLQNTLHKSLISSDTDEAWRSFKTLTNNSAFPSKSITNSLIAHLSSHGDIHNLKRSFASVVYIIEKNPKILDFQTVHAMLDSMKCANLAAPAFALVKCMFKNRFFVPFSVWGSVLVEISRKNSNLAAFLRLFEENCRIALDEKLDFMKPDLAACNAALEGSCRDLESVSDAEKVVETMTVLGVRPDESSFGFLAYLYSLKGLAQKIDELKFLMSGFGFSNKKEFYCNLIQGYVKSGKLASVELTILQSLKDRDDKSWNFGEETYCEVVKGYLQNGHIKGLANLIIEAQKLEPSNTVDKSIGYGIVSACVNSGLSNKAHSVLDEMNALGGSVGLGVYVPILKAYCKENRTAEATQLVMEISNSGLKLDVETYDALIDSSMSSQDFQSAFTLFRDMREARISDLKGSYLTIMTGLMENHRPELMAAFLDEVAEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMVFLQFEPNDQTYLSLINGYVLAEKYFNVLMLWNEVKRKLSADGQKGIKFEHSLVDAFLYAMVKGGFFDAVMQVVGKSNEMKIFVDKWRYKQAFMETHKKLKVSKLRRRNFRKMEALIAFKNWAGLNA 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1341 654 Gene3D Tetratricopeptide repeat domain 358 461 IPR011990 GO:0005515
Prci5g1341 654 Pfam PPR repeat 367 388 IPR002885 -
Prci5g1341 654 NCBIfam pentatricopeptide repeat 504 535 IPR002885 -
Prci5g1341 654 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 500 534 IPR002885 -
Prci5g1341 654 PANTHER BNAC05G43320D PROTEIN 11 653 - -
Prci5g1341 654 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 429 463 IPR002885 -
Prci5g1341 654 Pfam Pentatricopeptide repeat domain 417 462 IPR002885 -
Prci5g1341 654 MobiDBLite consensus disorder prediction 38 57 - -
Prci5g1341 654 Pfam PPR repeat family 504 546 IPR002885 -
Prci5g1341 654 Gene3D Tetratricopeptide repeat domain 462 612 IPR011990 GO:0005515
Prci5g1341 654 Gene3D Tetratricopeptide repeat domain 53 346 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1341 Prci-Chr5 32666060 32669099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1341 284 565 Miscellaneous Gene Families AT4G11690 23.053 2.65e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1341 - - qsa:O6P43_032910 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g1341 5 32666060 32669099 Prci5g1341 5 32666060 32669099 ECH