LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci5g1340	ATGAAAACTTCCTCTAGTTCCCCTTACATCGTTCTATTTCTGCATCTTTTACTCTTGCATCTCCAGATTGCTTTTGCTTATAATATCAGTTATTCTCCCTTGGAAAACATTGCCCTCAACTGTGGCACTAGCTCACCAGAACCTGTGTTATACGATGGAAGGAGCTGGACTGGAGATGCAGATTCACAGTATGAATCTTCTGATGTGGAAGCCAAGTCCCTGGTAGCCAAAGCCTCAATGATTAATGCATCTGTTCCTGAAGTTCCATACATGAGTGCTCGAGTGTTTCACTCTCAATTTACCTATAGATTCAATGTGACTCCTGGTCCGAAATTCATCCGCCTTCACTTCTACCCTACTTCTTACTTGGGTCTTGATGTCTCCAAAGCTTTTGTATCAGTCACTGCAGGTAATTTCACTCTTCTGCATAACCTGAGCGTTTCGCTCACTACTGATTACATGAACAAAGCATATCTGATGAAAGAGTTTATCATCCATGTGAGCGGAAGGACCTTGGAGCTGACCTTCACTCCATCATCCAATGCTTCGGATGTCTATGCATTCGTCAATGGAATCGAAGTTGTTTCCATGCCTTCCAATCTCTATATTCAGGGTGATAATGCCCACATTCCTTTAGTTGGTCATGATCCTGTGCTATATTACATTTATAATGATTCTGCCATGGAAACCATGCATAGAATCAATGCAGGAGGGGATGCAATTCCAGCCAAATATGATTCGGGACTGTTTCGTACTTGGCTTGGAGATGATGAACCTGTATATTTTCCTTCCGAAGGAGTTGAACCTGGTAATATGACCATGCCAATTATGTATCGGGAAACTGTTCCACCATATCTTGCACCAGAACTTGTCTACCGTACTGCCCTGGCAATGAATCCCTTTTTAGATGGCAGACTCAATCTAAACTATAATCTATCATGGTTCTTTTCAGTTGATTCTGGTTTCAATTATCTTGTTAGGCTACACTTCTGTGATGTCATCCAAGAGGTGACTTCGGTGAATCAGGTAGCCTTTACTATATACTTAAATAATCAAACAGCTATGGATGACTTTGATGTAATTGCTGTGACTGGTGGTCCTGGAGTTCCTGTGTACCTAGACTTTGTAGTGGTGGTTCCTGAAACAACCGAAGGAAAGAAGGATCTTTGGCTAGATCTTTATCCATCCGTGAGGAGTAAACCTCAGTATTACACTGCTTTCTTGAATGGTGCGGAGGTCTTTAAACTGAGCAAGTGGGATGGAAATCTTGCAGGGGTTAACCCTGTCAACAAGAAGTCTGAGTCATTTGCGCCGGTGCCCCATGCTGCAGCATCTGCAAAGACAAAGAAAATCACATTCATCATCATTGGATGTGGACTGAGTCCTGTGGCGTTAGGGGTATTAATTCTCTTTTTCCTGATTGTTTATAGGTTAAAACTAGTGAAGACAAGGAAGATCTCATGGCATGATCGCTTGATACTTATTCCTAATCAAGTGAAAAAAGCTCACAAAACATCTCGCCATCATTTTTCTCTGGATGAGATCAGAGTTGCAACAAATAACTTTGATGAGGCTCTGGTCGTCGGTATTGGTGGTTTTGGCAAAGTGTACAAGGCTAGTTTTGATCATGGCTCTACCTTTGTAGCCATAAAGGGGAGCAATCCAAGGTCAGAACAAGGTGCTTTAGAGTTTGAGACAGAGATCCATGTGCTCTCCCAGCTGCGCCACCACAACCTTGTTTCTCTTTTGGGTCATTGCAAAGAAGATGGGGAGATGATACTGGCTTATGAATACATGTCCAATGGTACTCTGTTTGACCATCTTCATTTGAGATCGAGGGAAGAACTTCCTTTGTCATGGATTCAACGTCTTGAGATATGTATCGGAGTGGCAAGGGGTTTGCACTACCTCCACACTGGCACAGAGCACAAGATCATCCACCGAGACATCAAGACAAGCAATATACTCCTGGACCATAACTGGGTGGCCAAAATTTCAGACTTCGGCTTGTCAAAGGTAGGCAACCCAACTTTAGTCAGCACCAACGTCAAGGGCAGTGCTGGATACTTAGATCCAGAGTACTTTCGGCATCACAAGCTGACTGAGAAATCTGATGTGTACTCATTTGGGGTGGTGTTATTGGAGGTGATAAGTGCAAGGCCTGCTGTGAATCCAGTTGAAGATGATGATGAACATGGTAACTTGGCAGACTGGGCTCTGTACTGCTGTGAGAATGGCATTACAACTCAGCTAGTGGAGCCCCACCTTGAAGGAAATATAGAAGCAGAATCTTTTGAGACATATATCGGGGTGGTCAAGAAATGCTTGGCTGAGAAAGGGGTAGAGCGCCCCACCATGAGTGAAGTGTTGCAGAGCCTTCTCCTCGCATTGCAGCTTCAGAGAAATGCTAATATAGCACCAACCAGTGGTGGCAATAGAACAGAAAATAGCGATTCAGGAAGCAACTCAGATTTGACACCGGGGATTGAGTTCTCTGAGATCATGATACCCATTGGACGTTGA	2523	0.4364	MKTSSSSPYIVLFLHLLLLHLQIAFAYNISYSPLENIALNCGTSSPEPVLYDGRSWTGDADSQYESSDVEAKSLVAKASMINASVPEVPYMSARVFHSQFTYRFNVTPGPKFIRLHFYPTSYLGLDVSKAFVSVTAGNFTLLHNLSVSLTTDYMNKAYLMKEFIIHVSGRTLELTFTPSSNASDVYAFVNGIEVVSMPSNLYIQGDNAHIPLVGHDPVLYYIYNDSAMETMHRINAGGDAIPAKYDSGLFRTWLGDDEPVYFPSEGVEPGNMTMPIMYRETVPPYLAPELVYRTALAMNPFLDGRLNLNYNLSWFFSVDSGFNYLVRLHFCDVIQEVTSVNQVAFTIYLNNQTAMDDFDVIAVTGGPGVPVYLDFVVVVPETTEGKKDLWLDLYPSVRSKPQYYTAFLNGAEVFKLSKWDGNLAGVNPVNKKSESFAPVPHAAASAKTKKITFIIIGCGLSPVALGVLILFFLIVYRLKLVKTRKISWHDRLILIPNQVKKAHKTSRHHFSLDEIRVATNNFDEALVVGIGGFGKVYKASFDHGSTFVAIKGSNPRSEQGALEFETEIHVLSQLRHHNLVSLLGHCKEDGEMILAYEYMSNGTLFDHLHLRSREELPLSWIQRLEICIGVARGLHYLHTGTEHKIIHRDIKTSNILLDHNWVAKISDFGLSKVGNPTLVSTNVKGSAGYLDPEYFRHHKLTEKSDVYSFGVVLLEVISARPAVNPVEDDDEHGNLADWALYCCENGITTQLVEPHLEGNIEAESFETYIGVVKKCLAEKGVERPTMSEVLQSLLLALQLQRNANIAPTSGGNRTENSDSGSNSDLTPGIEFSEIMIPIGR	840

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci5g1340	840	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	645	657	IPR008271	GO:0004672\|GO:0006468
	Prci5g1340	840	FunFam	FERONIA receptor-like kinase	36	198	-	-
	Prci5g1340	840	ProSitePatterns	Protein kinases ATP-binding region signature.	528	551	IPR017441	GO:0005524
	Prci5g1340	840	MobiDBLite	consensus disorder prediction	805	827	-	-
	Prci5g1340	840	SUPERFAMILY	Protein kinase-like (PK-like)	506	793	IPR011009	-
	Prci5g1340	840	FunFam	receptor-like protein kinase FERONIA	492	598	-	-
	Prci5g1340	840	Pfam	Protein kinase domain	527	792	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci5g1340	840	FunFam	probable LRR receptor-like serine/threonine-protein kinase RKF3	599	800	-	-
	Prci5g1340	840	ProSiteProfiles	Protein kinase domain profile.	522	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci5g1340	840	Gene3D	-	36	198	-	-
	Prci5g1340	840	Gene3D	-	226	417	-	-
	Prci5g1340	840	PANTHER	OS03G0124300 PROTEIN-RELATED	10	487	IPR046957	GO:0004672
	Prci5g1340	840	Gene3D	Transferase(Phosphotransferase) domain 1	599	810	-	-
	Prci5g1340	840	FunFam	FERONIA receptor-like kinase	226	417	-	-
	Prci5g1340	840	Gene3D	Phosphorylase Kinase; domain 1	507	598	-	-
	Prci5g1340	840	Pfam	Malectin-like domain	39	415	IPR024788	-
	Prci5g1340	840	SMART	serkin_6	522	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci5g1340	840	CDD	STKc_IRAK	528	789	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci5g1340	Prci-Chr5	32648727	32651495	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci5g1340	31	840	Receptor kinase-like Gene Family	AT3G51550	46.275	0.0	699

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Prci5g1340		Malectin_like	1.4e-33	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci5g1340	-		-	gmx:100776859	998.423