Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1318 ATGCCCAGCTCGAGGCAATCCTTCTGCATCTCCTCCTCCTCCTCTTCTTCTTACTTGTTTTGTATCCTTCTCTTCCACTCCATTTTTCTCTATGGACTAGCATTCTCTGCAAATCATGAGGCGTCTGTTCTCTTCTCTTGGCTTCATAGCTCTGCCTCACCGCCACCTCCATCTTTCTCCAACTGGAACATTCTTGACGCCAACCCATGCAATTGGACCTTCATTACATGTTCCTCACAAGGTTTTGTCACTGAAATCAATATACAATCCATCCCTCTAGAGCTTCCATTGCCTTTCAATCTCTCCTCCTTTTCCCATCTTCAAAAACTAGTCGTTTCTGATGCCAATCTTACTGGAACCATCCCTATTAACATCGGTGACTGCCCTGCCCTCTCTATCATTGACCTTAGCTCTAATAATCTTGTGGGGTCTATCCCTGCAAGTATAGGTAATCTTCAAAAGTTGGAGAGCTTGTCTCTGAACACCAACCAGCTTACAGGGAAAATCCCAGTAGAGCTAGGCAACTGCATTAACCTAAAAAGTATCCTCCTTTTTGATAACCAGCTGAGTGATGTTGTCCCACGCGAGTTAGGAAAGTTGTCAAAACTTGAGATCATTAGAGCTGGAGGAAACAAAGATTTAGTAGGGAAAATCCCTGAAGAGATTGGAGAATGCAGCAATTTGACTGAGCTGGGGCTGGCTGATACTGGTATTTCAGGCTCATTGCCAGCTTCATTGGGAAAACTGAGCAAGCTTCGGACTTTGTCCATCTATACTACAATGCTATCTGGTGAGATTCCAGCAGAGTTATGTAACTGCTCTGAACTTGTTGATCTATTCCTATATGAAAATAGTCTATCAGGGTCTATTCCATCTGAGCTGGGTAAACTTCAAAAGCTGGAGCAGTTGTTTTTATGGCAGAATAATCTTGTGGGAGCTATCCCAGAAGAGATTGGAAACTGTACGAGCTTGAAAAGAATTGATCTGTCTTTGAATTCTCTGTCTGGAACTATGCCTTTCTCTTTTGGGGTTCTGTTAGAACTTGAGGAGCTTATGATAAGTAATAATAATGTGTCTGGGTCAATACCTCCAAGTCTTTCAAATGCCTCATATCTGCAACAGCTGCAAGTTGACACAAATCAGCTCTCAGGTCTGATCCCCCCAGAGCTTGGAAAGCTATCAAAGCTCACAGTTTTCTTTGCTTGGCAAAACCAACTTGAAGGAAGTATTCCTTCTACTTTGGCAAACTGTAGTAATCTTCAAGCACTAGATTTGTCTCACAATGAGCTTACTGGTAGCATTCCTACTGGCCTCTTTCAACTTCAAAACCTTTCAAAGTTGCTCTTGATTTCTAATGATATTTCAGGTTCAATCCCATCAGAAATTGGCAGTTGTATTTCTCTTGTAAGACTGAGGCTTGGGAATAATAGGATTACTGGTGGGATCCCTAAGTCAATAGGGAGCCTAAAAAACCTGAACTTTTTGGACCTCAATGGCAATCACCTTTCTGGGCAAGTCCCAGATGAGATTGGCAACTGCACAGAGCTGCAAATGATTGACTTCAGCGGCAACAACTTAGAAGGTCCACTTCCTAATTCCTTGTCATCACTATCTTTGCTCCAAGTATTTGATGGATCTTCTAATAGGTTTTCAGGTCACATACCAGAAAGTTTAGGCCATCTTGTTTCACTAAATAAACTAATCCTTGGTAGAAACCTGTTTTCTGGACCAATTCCTGCATCATTGGGCCAATGTTCAAGTCTCCAAATGCTTGATCTTAGTGGCAATGAGCTCACAGGAAGAATTCCGGCAGAGCTGGGTCATATAGAGACTCTTGAAATTGCGCTTAACCTAAGCTGCAATTCTTTAAGTGGCCCAATTCCAGATCAGATTTCTGCTCTTACCAAGCTTTCTATACTAGACCTTTCTCATAACCAGTTAGAGGGAGGTTTAAACTCACTTGCAGGGCCAGATAATCTTGTCTCTCTTAATATTTCCTACAACAATTTCACAGGTTATCTACCAGATAATAAGCTTTTTAGGCAACTATCGCCAAAGGACCTAACTGGGAATCAAGGGCTTTGCACATCTGGTCAAGACTCATGCTTTGTGAGTGCTTCTAGCATGTCATTGAATGGAAGTGAGGCGAGGAAGTCACGAAGGATTAAGCTAGCTATCAGTTTGTTAGCAGTCTTGACAGTACTACTGACAGTAATGGGGATAATTGCAGTGATAAAGGCGCGAAGAACCATCAGAGATGATGATTCAGAACTAGGGGACTCATGGCCATGGCAATTCATTCCATTCCAGAAGCTAAACTTTTCAGTGGAGCAGGTGTTGAGAAGTTTAGTTGAAGGAAATATAATTGGAAAAGGATGTTCTGGTGTTGTTTACCGCGCTGAAATGGATGATGGTGAAGTCATTGCTGTGAAGAAATTGTGGCCAACAACAATGGATGCAGGAGACGGATTCAAGGATGATAAAAGTGGAATTCGTGACTCGTTCTCAACTGAGGTGAAAACCCTTGGCTCAATCCGTCACAAGAACATTGTTAGATTCTTGGGCTGTTGTTGGAATAAAAACACTAGATTGCTGATATATGATTATATGGCAAATGGGAGTTTGAGTAGTCTACTTCATGAGAGGACGGCAAATTGTTTGGAATGGGAACTCAGGTACAGAATTCTGTTAGGGGCTGCGGAAGGCCTTGCGTATTTGCACCATGACTGTGTGCCTCCTATAGTACATAGAGACATCAAAGCCAATAACATCCTCATTGGCATTGAGTTTGAGCCTTATATTGCTGACTTTGGCTTGGCTAAGCTAGTTGATGATGGCGGCTTTGGTCGGTCCTCCAATACAGTTGCCGGTTCTTACGGATACATTGCTCCGGAGTATGGCTTCATGATGAAGATCACAGAGAAAAGCGATGTTTATAGCTATGGTGTAGTGATGTTGGAAGTCTTGACAGGCAAGCAACCGATAGATCCGACGATACCAGTGGGCCAACATGTTGTTGATTGGGTGAGACAGAAGAGAGGTGTTGAAGTTCTTGACTCAAGCTTACTGTCAAGACCAGAATCAGAGATAGAGGAAATGATGCAGGCCTTAGGCATAGCCTTGTTGTGTGTAAATTCATTACCTGATGAGAGGCCAACAATGAAAGATGTTGCAGCAATGCTCAAAGAGATCAAACAAGAAAGAGAAGAATATGCAAAAGTCGATGCTCTTCTAAAGGGATCTCCTGCAAATAGTGTCAGGCCAACATCTTCATCATTATCATTGACAGTAGGGCAAAATTTGTACCCAGAAGGCAACAATACGATCTTCTCTGTATCGTCACTGCTTCATTCATCTTCTTCCAGTGCCAAAGTGGGTTTGAAGTGA 3387 0.4249 MPSSRQSFCISSSSSSSYLFCILLFHSIFLYGLAFSANHEASVLFSWLHSSASPPPPSFSNWNILDANPCNWTFITCSSQGFVTEINIQSIPLELPLPFNLSSFSHLQKLVVSDANLTGTIPINIGDCPALSIIDLSSNNLVGSIPASIGNLQKLESLSLNTNQLTGKIPVELGNCINLKSILLFDNQLSDVVPRELGKLSKLEIIRAGGNKDLVGKIPEEIGECSNLTELGLADTGISGSLPASLGKLSKLRTLSIYTTMLSGEIPAELCNCSELVDLFLYENSLSGSIPSELGKLQKLEQLFLWQNNLVGAIPEEIGNCTSLKRIDLSLNSLSGTMPFSFGVLLELEELMISNNNVSGSIPPSLSNASYLQQLQVDTNQLSGLIPPELGKLSKLTVFFAWQNQLEGSIPSTLANCSNLQALDLSHNELTGSIPTGLFQLQNLSKLLLISNDISGSIPSEIGSCISLVRLRLGNNRITGGIPKSIGSLKNLNFLDLNGNHLSGQVPDEIGNCTELQMIDFSGNNLEGPLPNSLSSLSLLQVFDGSSNRFSGHIPESLGHLVSLNKLILGRNLFSGPIPASLGQCSSLQMLDLSGNELTGRIPAELGHIETLEIALNLSCNSLSGPIPDQISALTKLSILDLSHNQLEGGLNSLAGPDNLVSLNISYNNFTGYLPDNKLFRQLSPKDLTGNQGLCTSGQDSCFVSASSMSLNGSEARKSRRIKLAISLLAVLTVLLTVMGIIAVIKARRTIRDDDSELGDSWPWQFIPFQKLNFSVEQVLRSLVEGNIIGKGCSGVVYRAEMDDGEVIAVKKLWPTTMDAGDGFKDDKSGIRDSFSTEVKTLGSIRHKNIVRFLGCCWNKNTRLLIYDYMANGSLSSLLHERTANCLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGIEFEPYIADFGLAKLVDDGGFGRSSNTVAGSYGYIAPEYGFMMKITEKSDVYSYGVVMLEVLTGKQPIDPTIPVGQHVVDWVRQKRGVEVLDSSLLSRPESEIEEMMQALGIALLCVNSLPDERPTMKDVAAMLKEIKQEREEYAKVDALLKGSPANSVRPTSSSLSLTVGQNLYPEGNNTIFSVSSLLHSSSSSAKVGLK 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1318 1128 Coils Coil 1054 1074 - -
Prci5g1318 1128 Pfam Leucine rich repeat N-terminal domain 37 78 IPR013210 -
Prci5g1318 1128 Gene3D Ribonuclease Inhibitor 615 702 IPR032675 -
Prci5g1318 1128 Gene3D Ribonuclease Inhibitor 242 336 IPR032675 -
Prci5g1318 1128 PRINTS Leucine-rich repeat signature 634 647 - -
Prci5g1318 1128 PRINTS Leucine-rich repeat signature 420 433 - -
Prci5g1318 1128 ProSitePatterns Protein kinases ATP-binding region signature. 789 812 IPR017441 GO:0005524
Prci5g1318 1128 SMART LRR_typ_2 345 369 IPR003591 -
Prci5g1318 1128 SMART LRR_typ_2 489 513 IPR003591 -
Prci5g1318 1128 SMART LRR_typ_2 561 585 IPR003591 -
Prci5g1318 1128 SMART LRR_typ_2 152 176 IPR003591 -
Prci5g1318 1128 SMART LRR_typ_2 634 657 IPR003591 -
Prci5g1318 1128 SMART LRR_typ_2 297 321 IPR003591 -
Prci5g1318 1128 SMART LRR_typ_2 417 441 IPR003591 -
Prci5g1318 1128 Gene3D Ribonuclease Inhibitor 160 241 IPR032675 -
Prci5g1318 1128 Gene3D Ribonuclease Inhibitor 337 433 IPR032675 -
Prci5g1318 1128 Gene3D Ribonuclease Inhibitor 530 614 IPR032675 -
Prci5g1318 1128 FunFam Putative LRR receptor-like serine/threonine-protein kinase 615 700 - -
Prci5g1318 1128 Pfam Leucine rich repeat 467 526 IPR001611 GO:0005515
Prci5g1318 1128 Pfam Leucine rich repeat 105 165 IPR001611 GO:0005515
Prci5g1318 1128 Gene3D Phosphorylase Kinase; domain 1 769 869 - -
Prci5g1318 1128 SUPERFAMILY Protein kinase-like (PK-like) 760 1061 IPR011009 -
Prci5g1318 1128 FunFam LRR receptor-like serine/threonine-protein kinase 535 610 - -
Prci5g1318 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 436 530 - -
Prci5g1318 1128 ProSiteProfiles Protein kinase domain profile. 783 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1318 1128 Gene3D Ribonuclease Inhibitor 434 529 IPR032675 -
Prci5g1318 1128 ProSiteProfiles Leucine-rich repeat profile. 419 441 IPR001611 GO:0005515
Prci5g1318 1128 SUPERFAMILY RNI-like 110 501 - -
Prci5g1318 1128 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 212 435 - -
Prci5g1318 1128 Pfam Protein tyrosine and serine/threonine kinase 786 1060 IPR001245 GO:0004672|GO:0006468
Prci5g1318 1128 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 766 869 - -
Prci5g1318 1128 Gene3D Ribonuclease Inhibitor 39 155 IPR032675 -
Prci5g1318 1128 Gene3D Transferase(Phosphotransferase) domain 1 870 1080 - -
Prci5g1318 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 914 926 IPR008271 GO:0004672|GO:0006468
Prci5g1318 1128 PANTHER RECEPTOR-LIKE PROTEIN 55 443 1066 - -
Prci5g1318 1128 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 870 1079 - -
Prci5g1318 1128 FunFam Nuclear pore complex protein NUP107 37 195 - -
Prci5g1318 1128 SUPERFAMILY RNI-like 353 676 - -
Prci5g1318 1128 SMART serkin_6 783 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1318 Prci-Chr5 32539851 32544391 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1318 35 1088 Receptor kinase-like Gene Family AT5G56040 48.737 0.0 975
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci5g1318 PK_Tyr_Ser-Thr 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1318 - - gmx:100818541 1659.43