Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1316 ATGCCCAGCTCGAGGCAATCCTTCTGCATCTCTTCCTCCTCCTCTTCTTCTTACTTGTTTTGTATCCTTCTCTTCCACTCCATTTTTCTCTATGGACTAGCATTCTCTGCAAATCATGAGGCGTCTGTTCTCTTCTCTTGGCTTCATAGCTCTGCCTCACCGCCACCTCCATCTTTCTCCAACTGGAACATTCTTGACGCCAACCCATGCAATTGGACCTTCATAACATGTTCCTCACAAGGTTTTGTCACTGAAATCAATATACAATCCATCCCTCTAGAGCTTCCATTGCCTTCCAATCTCTCCTCCTTTTCCCATCTTCAAAAACTAGTTGTTTGTGATGCCAATCTTACTGGAACCATCCCTATTAACATCGGTGACTGCCCTGCCCTCTCTATCATTGACCTTAGCTCTAATAATCTTGTGGGGTCTATCCCTGCAAGTATAGGTTATCTTCAAAAGTTGGAGAGCTTGTCTCTGAACACCAACCAGCTTACAGGGAAAATCCCAGTAGAGCTAGGCAACTGCATTAACCTAAAAAGTATCCTCCTTTTTGATAACCAGCTGAGTGATGTTATCCCACGTGAGCTAGGAAAATTGTCAAAACTTGAGATCATTAGAGCTGGAGGAAACAAAGATTTAGTAGGGAAAATCCCTGAAGAGATTGGAGAATGCAGCAATTTGACTGAGCTGGGGCTGGCTGATACTGGTATTTCAGGCTCATTGCCAGCTTCATTGGGAAAACTGAGCAAGCTTCAGACTTTGTCCATCTACACTACAATGCTATCTGGTGAGATTCCAGCAGAGTTATGTAACTGCTCTGAACTTGTTGATCTATTCCTATATGAAAATAGTCTATCAGGGTCTATTCCATCTGAGCTGGGTAAGCTTCAAAAGCTGGAGCAGTTGTTTTTATGGCAGAATAATCTTGTGGGAGCTATCCCAGAAGAGATTGGAAACTGTAGAAGCTTGAAAAGAATTGATCTGTCTTTGAATTCTCTATCTGGAACTATACCTTTCTCTTTTGGGGGTCTGTTAGAACTTGAGGAGCTAATGATAAGTAATAATAATGTGTCTGGGTCAATACCTCCAAGTCTTGCAAATGCCTCATATCTGCAACAGCTGCAGGTTGACACAAATCAGCTCTCAGGTCCGATCCCCCCAGAGCTTGGAAAGCTATCAAAGCTCACAGTTTTCTTTGCTTGGCAAAACCAACTTGAAGGAAGTATTCCTTCTACTTTGGCAAACTGTAGTAATCTTCAAGCACTAGATTTGTCTCACAATGAGCTTACTGGTAGCATTCCTACTGGCCTCTTTCAACTTCAAAACCTTTCAAAGTTGCTCTTGATTTCTAATGATATTTCAGGTTCAATCCCATCAGAAATTGGCAGTTGTAGTTCTCTTGTAAGACTGAGGCTTGGGAATAATAGGATTACTGGTGGGATCCCAAAGTCAATAGGGAGCCTAAAAAACCTGAACTTTTTGGACCTCAATGGCAATCACCTTTCTGGGCAAGTCCCAGATGAGATTGGCAACTGCACAGAGCTGCAAATGATTGACTTCAGCAGCAACAACTTAGAAGGTCCACTTCCTAATTCCTTGTCATCACTATCTTTGCTCCAAGTATTTGATGGATCTTCTAACAGGTTTTCAGGTCACATACCAGAAAGTTTAGGCCATCTTGTTTCACTAAATAAACTAATCCTTGGTAGAAACCTGTTTTCTGGACCAATTCCGGCATCATTGGGCCAATGTTCAAGTCTCCAAATGCTTGATCTTAGTGGCAATGAGCTCACAGGAAGAATTCCGGCAGAGCTGGGTCATATAGAGACTCTTGAAATTGCGCTTAACCTAAGCTGCAATTCTTTAAGTGGCCCAATTCCAGATCAGATTTCTGCTCTTACCAAGCTTTCTATACTAGACCTTTCTCATAACCAGTTAGAGGGAGGTTTAAACTCACTTGCAGGGCCAGATAATCTTGTCTCTCTTAATATTTCCTACAACAATTTCACAGGTTATCTACCAGATAATAAGCTTTTTAGGCAACTATCGCCAAAGGACCTAACTGGGAATCAAGGGCTTTGCACATCTGGTCAAGACTCATGCTTTGTGAGTGCTTCTAGTATGTCATTGAATGGAAGTGAGGCGAGGAAGTCACGAAGGATTAAGCTAGCTATCAGTTTGTTAGCAGTCTTGACAGTACTACTGACAGTAATGGGGATAATTGCAGTGATAAAGGCGCGAAGAACCATCAGAGATGATGATTCAGAACTAGGGGACTCATGGCCATGGCAATTCATTCCATTCCAGAAGCTAAACTTTTCAGTGGAGCAGGTGTTGAGAAGTTTAGTTGAAGGAAATATAATTGGAAAAGGATGTTCTGGTGTTGTTTACCGCGCTGAAATGGATGATGGTGAAGTCATTGCTGTGAAGAAATTGTGGCCAACAACAATGGATGCAGGAGACGGATTCAAGGATGATAAAAGTGGAATTCGTGACTCGTTCTCAACTGAGGTGAAAACCCTTGGCTCAATCCGTCACAAGAACATTGTTAGATTCTTGGGCTGTTGTTGGAATAAAAACACTAGATTGCTGATATATGATTATATGGCAAATGGGAGTTTGAGTAGTCTACTTCATGAGAGGACGGGAAATTTTTTGGAATGGGAACTCAGGTACAGAATTCTGTTAGGGGCTGCGGAAGGCCTTGCATATTTGCACCATGATTGTGTGCCTCCTATAGTACATAGAGACATCAAAGCCAATAACATCCTCATTGGCATTGAGTTTGAGCCTTATATTGCTGACTTTGGCTTGGCTAAGCTAGTTGATGATGGCGGCTTTGGTCGGTCCTCCAATACAGTTGCCGGTTCTTATGGATACATTGCTCCGGAGTATGGCTACATGATGAAGATCACAGAGAAAAGCGATGTTTATAGCTATGGTGTGGATTTGGAAGTCTTGACAGGCAAGCAACCGATAGATCCGACGATACCAGTGGGCCAACATGTTGTTGATTGGGTGAGACAGAAGAGAGGTGTTGAAGTTCTTGACTCAAGCTTACTGTCAAGACCAGAATCAGAGATAGAGGAAATGATGCAGGCCTTAGGCATAGCCTTGTTGTGTGTAAATTCATTACCTGATGAGAGGCCAACAATGAAAGATGTTGCAGCAATGCTCAAAGAGATCAAACAAGAAAGAGAAGAATATGCAAAAGTCGATGCTCTTCTAAAGGGATCTCCTGCAAATAGTGTCAGGCCAACATCTTCATCATTATCATTGACAGCAGGGCAAAATTTGAACCCAGAAGGCAACAATACGATCTTCTCTGTATCGTCACTGCTTCGTTCATCTTCTTCCAGTGCCAAAGTGGGTTTGAAGTGA 3384 0.4243 MPSSRQSFCISSSSSSSYLFCILLFHSIFLYGLAFSANHEASVLFSWLHSSASPPPPSFSNWNILDANPCNWTFITCSSQGFVTEINIQSIPLELPLPSNLSSFSHLQKLVVCDANLTGTIPINIGDCPALSIIDLSSNNLVGSIPASIGYLQKLESLSLNTNQLTGKIPVELGNCINLKSILLFDNQLSDVIPRELGKLSKLEIIRAGGNKDLVGKIPEEIGECSNLTELGLADTGISGSLPASLGKLSKLQTLSIYTTMLSGEIPAELCNCSELVDLFLYENSLSGSIPSELGKLQKLEQLFLWQNNLVGAIPEEIGNCRSLKRIDLSLNSLSGTIPFSFGGLLELEELMISNNNVSGSIPPSLANASYLQQLQVDTNQLSGPIPPELGKLSKLTVFFAWQNQLEGSIPSTLANCSNLQALDLSHNELTGSIPTGLFQLQNLSKLLLISNDISGSIPSEIGSCSSLVRLRLGNNRITGGIPKSIGSLKNLNFLDLNGNHLSGQVPDEIGNCTELQMIDFSSNNLEGPLPNSLSSLSLLQVFDGSSNRFSGHIPESLGHLVSLNKLILGRNLFSGPIPASLGQCSSLQMLDLSGNELTGRIPAELGHIETLEIALNLSCNSLSGPIPDQISALTKLSILDLSHNQLEGGLNSLAGPDNLVSLNISYNNFTGYLPDNKLFRQLSPKDLTGNQGLCTSGQDSCFVSASSMSLNGSEARKSRRIKLAISLLAVLTVLLTVMGIIAVIKARRTIRDDDSELGDSWPWQFIPFQKLNFSVEQVLRSLVEGNIIGKGCSGVVYRAEMDDGEVIAVKKLWPTTMDAGDGFKDDKSGIRDSFSTEVKTLGSIRHKNIVRFLGCCWNKNTRLLIYDYMANGSLSSLLHERTGNFLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGIEFEPYIADFGLAKLVDDGGFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGVVXLEVLTGKQPIDPTIPVGQHVVDWVRQKRGVEVLDSSLLSRPESEIEEMMQALGIALLCVNSLPDERPTMKDVAAMLKEIKQEREEYAKVDALLKGSPANSVRPTSSSLSLTAGQNLNPEGNNTIFSVSSLLRSSSSSAKVGLK 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1316 1128 Coils Coil 1054 1074 - -
Prci5g1316 1128 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 419 706 - -
Prci5g1316 1128 Gene3D Ribonuclease Inhibitor 36 211 IPR032675 -
Prci5g1316 1128 FunFam Leucine-rich repeat receptor protein kinase EMS1 314 413 - -
Prci5g1316 1128 PRINTS Leucine-rich repeat signature 634 647 - -
Prci5g1316 1128 PRINTS Leucine-rich repeat signature 420 433 - -
Prci5g1316 1128 ProSitePatterns Protein kinases ATP-binding region signature. 789 812 IPR017441 GO:0005524
Prci5g1316 1128 Gene3D Transferase(Phosphotransferase) domain 1 870 1080 - -
Prci5g1316 1128 MobiDBLite consensus disorder prediction 1083 1105 - -
Prci5g1316 1128 Pfam Leucine rich repeat 322 382 IPR001611 GO:0005515
Prci5g1316 1128 Pfam Leucine rich repeat 105 165 IPR001611 GO:0005515
Prci5g1316 1128 Gene3D Ribonuclease Inhibitor 212 446 IPR032675 -
Prci5g1316 1128 Gene3D Ribonuclease Inhibitor 447 705 IPR032675 -
Prci5g1316 1128 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 870 1079 - -
Prci5g1316 1128 SUPERFAMILY Protein kinase-like (PK-like) 760 1061 IPR011009 -
Prci5g1316 1128 Pfam Protein kinase domain 785 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1316 1128 FunFam Predicted protein 194 292 - -
Prci5g1316 1128 FunFam Nuclear pore complex protein NUP107 37 193 - -
Prci5g1316 1128 ProSiteProfiles Leucine-rich repeat profile. 419 441 IPR001611 GO:0005515
Prci5g1316 1128 Pfam Leucine rich repeat N-terminal domain 37 78 IPR013210 -
Prci5g1316 1128 SMART serkin_6 783 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1316 1128 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 766 869 - -
Prci5g1316 1128 SUPERFAMILY L domain-like 47 404 - -
Prci5g1316 1128 ProSiteProfiles Protein kinase domain profile. 783 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1316 1128 SUPERFAMILY RNI-like 361 676 - -
Prci5g1316 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 914 926 IPR008271 GO:0004672|GO:0006468
Prci5g1316 1128 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 526 1061 - -
Prci5g1316 1128 SMART LRR_typ_2 345 369 IPR003591 -
Prci5g1316 1128 SMART LRR_typ_2 561 585 IPR003591 -
Prci5g1316 1128 SMART LRR_typ_2 489 513 IPR003591 -
Prci5g1316 1128 SMART LRR_typ_2 152 176 IPR003591 -
Prci5g1316 1128 SMART LRR_typ_2 634 657 IPR003591 -
Prci5g1316 1128 SMART LRR_typ_2 297 321 IPR003591 -
Prci5g1316 1128 SMART LRR_typ_2 417 441 IPR003591 -
Prci5g1316 1128 Gene3D Phosphorylase Kinase; domain 1 769 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1316 Prci-Chr5 32511561 32516106 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1316 35 1088 Receptor kinase-like Gene Family AT5G56040 49.111 0.0 982
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci5g1316 Pkinase 7.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1316 - - gmx:100818541 1649.03