Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1257 ATGGTTCCAAGTGAAATCAGAGGGTTCCACTATCCGGCGCCTGAAAATCCCATCTTAGTTCCTCCAAATCTCGGCTTGTTTCAGCATGGTGATATCCAAAACCAGATTCACCTGAACACCCTCTTGAGCAATTTGCCAAACTGCTACTTCCCTTCTGGTTCAGGAAGCCTTGAGTTTGTTCCTCCCCTTCCACTTGCTTCTTCAAGCTGCTGCCTCAGCAGCAACTCAACTTCTGATGAAGCTGATGAGATTCAGCTCAGCATCATTGATGAAAGAAGGCAGAGGCGAATGATATCGAACCGAGAATCTGCCAGGAGGTCCAGGATGAGGAAGCAGAAGCACTTGGATGAGCTGTGGTCACAGGTGGTGAGGCTCAGGAATGAGAACCACAACCTCATTGACAAACTCAACCATGTGTCTGAGTCACATGATAGAGTTCTTCAGGAGAATGCACGACTCAAGGAAGAAGCTTCTGATCTTCGTCAACTGCTAGCTGACCTGAAAATTAGCTCTTCTTTTGCCGACAGCATGAGAGATTTTGATGAACTCAGAGCTGAGCTATCAAACTAA 570 0.4684 MVPSEIRGFHYPAPENPILVPPNLGLFQHGDIQNQIHLNTLLSNLPNCYFPSGSGSLEFVPPLPLASSSCCLSSNSTSDEADEIQLSIIDERRQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHNLIDKLNHVSESHDRVLQENARLKEEASDLRQLLADLKISSSFADSMRDFDELRAELSN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1257 189 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 95 110 IPR004827 GO:0003700|GO:0006355
Prci5g1257 189 Coils Coil 136 170 - -
Prci5g1257 189 Gene3D - 90 145 - -
Prci5g1257 189 SMART brlzneu 88 152 IPR004827 GO:0003700|GO:0006355
Prci5g1257 189 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 90 153 IPR004827 GO:0003700|GO:0006355
Prci5g1257 189 FunFam BZIP transcription factor 90 141 - -
Prci5g1257 189 Pfam bZIP transcription factor 92 150 IPR004827 GO:0003700|GO:0006355
Prci5g1257 189 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 32 179 IPR044521 -
Prci5g1257 189 CDD bZIP_plant_GBF1 93 144 IPR045314 GO:0003700|GO:0006355
Prci5g1257 189 SUPERFAMILY Leucine zipper domain 92 142 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1257 Prci-Chr5 31729951 31731356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1257 59 174 bZIP Transcription Factor Family AT3G30530 64.407 3.52e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci5g1257 bZIP_1 2.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1257 - - gmx:778126 255.373