Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1252 ATGGCACAATATGCTTCTGGTGCTGCTGATTCACATCACGGGCGCCCTGCTCTCTTGAAAGATCAAGTTTGCTTGGTTAAAAGGAAAGACTCTGATCGCTATGAGATATCTCCAATCCACAATGAACTATCATTTGAGAAGGGATTTTTTGTTGTGATCCGTGCATGCCAAATGTTGTCTCAAAATAATGATGGAATAATTTTGGTAGGGTTGGCTGGTCCTTCGGGGGCTGGTAAGACTGTATTCACTGACAAAATAGTCAACTTCATGCCCAGCATTGCAGTCATTTCGATGGATAATTACAATGATTCAAGTCGAGTTGTTGATGGAAATTTTGATGATCCACGACTGACAGACTATGACACATTACTTCAGAATGTAGAAGATTTAAAGGCAGGAAAGCCAGCCCAGGTTCCAATCTATGATTTCAAGTCCAGCTCACGTTTAGGATACAGGACAGTTGAAGTCCCAAGCTCCCGAATTGTGATCATTGAGGGTATCTATGCTTTGAGTGATAGGTTGCGACCTCTACTGGACCTTCGTATATCTGTTACTGGTGGAGTTCATTTTGACCTAGTCAAACGAGTTATACGTGACATTCAACGTGCGGGTCAACAACCTGGAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGCTCTTTATAGAGCAAGATCTTCAGACAGCACATATCAAAATAATCAACAAGTTCAATCCATTTACTGGGTTCCAGAGTCCTACTTACATATTAAAATCAGCAAGGAATGTGACAGTTGATCAAATTAAAGCTGTTTTATCTGAAGCTTTTGTGGAAACAAATGAGCAGATTTATGACATATATCTTCTGCCACCGGGTGAAGATCCTGAAACTTGCCAATCTTATTTACGGATGCGGAATAAGGAGGGGAAATACTGTCTAATGTTTGAGGAATGGGTGACAGATAATCCATTTGTCATTTCACCAAGAATATCTTTTGAGGTTAGTGTGCGGCTCCTTGGAGGTCTGATGGCCCTGGGATACACAATAGCTACCATTCTAAAAAGAAACAGCCATGTATTCTCTGATGATAAGGTGTCGGTGAAACTTGATTGGCTTGAGCAGCTTAATCGACAATATGTTCAGGTGCAAGGAAAAGATCGATCGACTGTAAGATGCATAGCCCAACATCTCAGCATGGAAGGTTCCTATATTGCTCGTACGTACATTGAGCAATTTCAACTGGAAAAGATTGTAGATGAGGTTATGGCCCTTCCAGATGATTTAAAAGCAAAGCTCGGCCTAGGTGAGGATATGGTGTCTAGCCCAAAAGAAGCACTTTCTAAAGCCTTTGCAGATAGGGTTCCCGTGAGAAAAACGCATATGAGTGGTATGTCCCAGTCATATACAAGCCAGAGGGACAAAAATCTGCTCAAGCATTTGCGATATGGTGTCAGCAACCGAGCATTTGGTGAAAGAAATCCAGATTCCTTCATAGCTCTAACAAATGAGCTTACAGAACAAATTTCTTCGCTCAATGATAGAATTGATGAGTTTACAAGTCGTCTTGAAGAGTTTAATTCCAAGTTAAGCATCAATCAAAATTCTCCAAGCCAACAAACCGCAGCACTTCAAGCTGAAGCTTGCAATGGCTCTGCTCCCACCTCTCACTTCATCACTAGTTTGGGAAGTGGTTCTATAACTGGATCTATTATGAAGTCCTCATCTTCATTGCAATTGGCTAAGGAGTCACCTTTAACAGATGAGATATTGTGTATTGCAAAAGGGCAGCGCCAGATCTTGCAGAAAATAGACAATCTCGATAGCCTTCTCCATGGGAACATGGGAGACAAATCTCGTCAACCAAGAACTAACAGGACAAGCATGGCTTCTGCTTTAGATCCCACTTCAGTTCGTGCCCTTGTTGCTATCACTTTTGGTTGTGTTGGGTTATTCTTGGTGAAGGGGTTGGTGACTAGAACTTAG 1974 0.4154 MAQYASGAADSHHGRPALLKDQVCLVKRKDSDRYEISPIHNELSFEKGFFVVIRACQMLSQNNDGIILVGLAGPSGAGKTVFTDKIVNFMPSIAVISMDNYNDSSRVVDGNFDDPRLTDYDTLLQNVEDLKAGKPAQVPIYDFKSSSRLGYRTVEVPSSRIVIIEGIYALSDRLRPLLDLRISVTGGVHFDLVKRVIRDIQRAGQQPGEIIHQISETVYPMYKLFIEQDLQTAHIKIINKFNPFTGFQSPTYILKSARNVTVDQIKAVLSEAFVETNEQIYDIYLLPPGEDPETCQSYLRMRNKEGKYCLMFEEWVTDNPFVISPRISFEVSVRLLGGLMALGYTIATILKRNSHVFSDDKVSVKLDWLEQLNRQYVQVQGKDRSTVRCIAQHLSMEGSYIARTYIEQFQLEKIVDEVMALPDDLKAKLGLGEDMVSSPKEALSKAFADRVPVRKTHMSGMSQSYTSQRDKNLLKHLRYGVSNRAFGERNPDSFIALTNELTEQISSLNDRIDEFTSRLEEFNSKLSINQNSPSQQTAALQAEACNGSAPTSHFITSLGSGSITGSIMKSSSSLQLAKESPLTDEILCIAKGQRQILQKIDNLDSLLHGNMGDKSRQPRTNRTSMASALDPTSVRALVAITFGCVGLFLVKGLVTRT 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1252 657 Gene3D - 67 249 IPR027417 -
Prci5g1252 657 ProSiteProfiles CYTH domain profile. 249 411 IPR023577 -
Prci5g1252 657 CDD UMPK_like 68 240 - -
Prci5g1252 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 237 IPR027417 -
Prci5g1252 657 SUPERFAMILY CYTH-like phosphatases 261 408 IPR033469 -
Prci5g1252 657 Coils Coil 498 525 - -
Prci5g1252 657 PANTHER URIDINE KINASE 33 423 - -
Prci5g1252 657 Pfam Phosphoribulokinase / Uridine kinase family 69 237 IPR006083 GO:0005524|GO:0016301
Prci5g1252 657 Gene3D - 255 414 - -
Prci5g1252 657 PRINTS Uridine kinase signature 133 148 - -
Prci5g1252 657 PRINTS Uridine kinase signature 189 199 - -
Prci5g1252 657 PRINTS Uridine kinase signature 66 83 - -
Prci5g1252 657 Pfam CYTH domain 270 405 IPR023577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1252 Prci-Chr5 31668666 31678760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1252 67 226 PRT Gene Family AT5G40870 30.769 3.80e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1252 K00876 - qsa:O6P43_032837 956.051