Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1242 ATGAGGGATGAAAGAAGAAGAAGAAAGCTGCGTCTCAGCAAGATCTATTCATTCACCTGTGGGAGATCATCATTCAAAGAAGATTATTCAAATATTGGAGGAAGAGGCTATTCGAGGGTTGTCTTCTGCAATGAACCGAACAGCCCTGAGGCTGCAATTCAGAATTATCCAGATAATTCTGTCAGTTCTACTAAATATACTCTCGCTACTTTCCTGCCTAAGTCACTGTTTGAACAGTTTAGGAGAGTGGCTAATTTTTATTTTTTAGTCACTGGTGTCTTATCCTTCACCAAACTTGCCCCCTATTCGGCTGTTAGTGCTATTATTCCTCTGATAATCGTCATTGGTGCAACCATGGTGAAGGAAGGTATTGAAGATTGGCGTCGCAAAAAGCAGGATATTGAGGTGAACAATAGGAAAGTTCAAGTGCATAAAGGTGATGGTGTTTTCGAATATACCCAGTGGAAGAATTTGATGGTAGGGGATATTGTGAAGGTGGAGAAGGATGAATTCTTTCCAGCGGACCTTCTGTTGCTTTCATCCAGCTATGATGATGCTATCTGTTATGTTGAGACCATGAATTTGGATGGAGAGACAAATTTGAAGTTGAAACAAGGATTGGAGGTAACTTCTTACTTGCAAGAGGGTTTTAACTTCAGGTATTTTAAAGGGACCGTAAAATGTGAAGATCCAAATGCAAATTTATACTCTTTTATTGGTAGCTTGGATTTTAAGGAGCTTCAATATCCTCTTTCTCCTCAGCAACTTCTTTTGAGAGACTCTAAACTCCGAAATACATCTTACATATTTGGAGCTGTTATTTTCACTGGTCACGACACTAAAGTAATACAAAATTCTACTGCTCCCCCTTCAAAGAGAAGTAGGATCGAGAAGAAGATGGACAAAGTGATATATTTCATGTTCTGTTTGCTATTGCTATTGTCATCTGTTGGATCCGTTGTCTTTGGCATCACAACAAAAGATGACTTGAAGAATGGATTGATGAAAAGGTGGTATCTAAGGCCAGATAGTTCCACAATTTTCTTTGATCCAAAAAGATCAGCAGCAGCTGCAATATATCATTCCTTAACAGCCTTAATGTTGTATAGCTACTTCATTCCAATCTCCTTGTACGTGTCAATAGAAATTGTGAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGAGGCAGACAAGCCTGCTCATGCCCGTACTTCAAACTTGAATGAAGAACTTGGCCAGGTTGACACAATACTTTCTGATAAAACTGGCACTCTGACCTGCAACTCAATGGAGTTCATTAAATGTTCAGTTGCTGGGGTGGCTTATGGACGTGGTATTACAGAGGTTGAGAAGTCTATGGGTAGAAGAAAAGGCTCGCCATTGATCCATGAACAGGTTAATGGCATAGAATTAGATGAAATCAGGGATTCTACTGATGCCAAAACGCCCATCAAAGGTTTTAATTTTTCAGACGAAAGGATAACGAATGGCAAATGGGTTAATGAGCCAAATGCTGATATTATCCAAAAGTTTTTCCGCTTATTGGCAATCTGTCATACAGCCATACCTGAAGTGGACGAGGACACAGGAAAAGTCTCGTATGAGGCTGAATCTCCAGATGAAGCAGCATTTGTTATTGCAGCTAGAGAACTTGGCTTTGAGTTCTACAAAAGGACTCAGACTAGTGTGTCAATTCATGAGTTGGATCTAGTTTCTGGCAAGAAAGTTGAAAGGGTCTACAAACTTCTCAATGTTTTAGAATTTAATAGCGCAAGGAAGCGAATGTCAGTTATAGTGAAAGATGAAGAGGGAAAAATTTTGCTACTCAGTAAAGGCGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGAGTGGGAGAGAGTTTGAAGAGAAAACCATGAAGCATGTGCATGAATATGCTGATGCAGGTCTTAGGACCCTCATACTAGCCTATCGTGAACTAGATGAAGAAGAATATAAGGAGTTTGATGAGAAATTTTCTGAAGCCAAAAACTCAGTCAGTGCAGATAAGGAAACGCTAATTGGTGAAGTATCAGATAACGTTGAGAGGAATCTAATCCTCCTTGGTGCCACTGCAGTAGAGGACAAACTCCAGAATGGCGTTCCTGATTGCATCGATAAGCTTGCTCAAGCAGGAATTAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATCATTCATCTGGAGACTCCAGAAATTCAAACATTGGAGAAGGAGGGGGACAAAATTTCCATTGCCAAGGCATCAAGAGAAAGTGTCCGCCACCAGATATCTGAAGGCCGAGCCCAGCTTGCTGGATCCAGTGGGACCTCTCAGCAAGCATTTGCTCTGATTATTGATGGAAAATCTCTTGTTTATGCTCTAGAGGATGAAATGAAGAACATGTTTCTGGACCTTGCAATTAGCTGTGCATCTGTTATCTGCTGTCGCTCCTCGCCCAAGCAGAAGGCATTGGTCACGAGACTGGTTAAATCTGGCACTGGAAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTGGGGATGCTTCAAGAGGCAGATATAGGGATTGGAATCAGTGGCGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATGTTGCAATTGCACAGTTCAGATATTTGGAACGGTTACTACTTGTGCATGGACATTGGTGTTATAGAAGGATATCATTGATGATATGTTACTTTTTCTACAAGAACATCACGTTTGGCTTCCCTCTGTTCTTATATGAGGTGTATTCTTCATTCTCTGCACAACCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTCTCTTCACTTCCTGTGATTGCCCTCGGTGTATTTGACCAGGATGTCTCTGGCCGGTACTGTCTTAAGTTTCCTTTGCTTTATCAAGAAGGAGTAGAGAATATGCTCTTCAGTTGGCGCCGTATATTCAGTTGGATGCTAAATGGATTCATTAGTGCCATCATAATCTTCTTCTTTTGCACAAAAGCAATGGAGCTTCAGGCCTTTGACAAGGATGGAAGAACTGCCGGGAGAGACATCCTTGGAGCAACAATGTATACCTGTGTTGTGTGGGTTGTGAACTTGCAGATGGCACTTGCCATAAGCTACTTCACCTGGATACAGCATATTTTCATCTGGGGTTCCATAGCTTTTTGGTATATTTTCCTGATGATATATGGAGCAATGACTCCTTCATTTTCCACAAATGCTTACAAAGTCTTCCTTGAAACTCTTGCTCCCTCGGTTTCCTTTTGGCTCGTGACATTCTTCGTGGTCATCTCAACTCTCACACCATACTTCTCATACACAGCAATGCAGAGGAGGTTCTTCCCATTGTATCATGAAATGGTCCAGTGGGTCAGGTATGAAGGGAAGACCAATGATCCTGAGTATTGTGACATGGTGAGGCAGAGATCGTTGCGGCCAACAACCGTGGGATCAACAGCCCGCTTAGCAGCTAGAAACAGAACTTCTAACCATAGATGA 3588 0.4128 MRDERRRRKLRLSKIYSFTCGRSSFKEDYSNIGGRGYSRVVFCNEPNSPEAAIQNYPDNSVSSTKYTLATFLPKSLFEQFRRVANFYFLVTGVLSFTKLAPYSAVSAIIPLIIVIGATMVKEGIEDWRRKKQDIEVNNRKVQVHKGDGVFEYTQWKNLMVGDIVKVEKDEFFPADLLLLSSSYDDAICYVETMNLDGETNLKLKQGLEVTSYLQEGFNFRYFKGTVKCEDPNANLYSFIGSLDFKELQYPLSPQQLLLRDSKLRNTSYIFGAVIFTGHDTKVIQNSTAPPSKRSRIEKKMDKVIYFMFCLLLLLSSVGSVVFGITTKDDLKNGLMKRWYLRPDSSTIFFDPKRSAAAAIYHSLTALMLYSYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGVAYGRGITEVEKSMGRRKGSPLIHEQVNGIELDEIRDSTDAKTPIKGFNFSDERITNGKWVNEPNADIIQKFFRLLAICHTAIPEVDEDTGKVSYEAESPDEAAFVIAARELGFEFYKRTQTSVSIHELDLVSGKKVERVYKLLNVLEFNSARKRMSVIVKDEEGKILLLSKGADSVMFERLAKSGREFEEKTMKHVHEYADAGLRTLILAYRELDEEEYKEFDEKFSEAKNSVSADKETLIGEVSDNVERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLETPEIQTLEKEGDKISIAKASRESVRHQISEGRAQLAGSSGTSQQAFALIIDGKSLVYALEDEMKNMFLDLAISCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFRYLERLLLVHGHWCYRRISLMICYFFYKNITFGFPLFLYEVYSSFSAQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSGRYCLKFPLLYQEGVENMLFSWRRIFSWMLNGFISAIIIFFFCTKAMELQAFDKDGRTAGRDILGATMYTCVVWVVNLQMALAISYFTWIQHIFIWGSIAFWYIFLMIYGAMTPSFSTNAYKVFLETLAPSVSFWLVTFFVVISTLTPYFSYTAMQRRFFPLYHEMVQWVRYEGKTNDPEYCDMVRQRSLRPTTVGSTARLAARNRTSNHR 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1242 1195 SUPERFAMILY HAD-like 420 922 IPR036412 -
Prci5g1242 1195 Pfam Phospholipid-translocating ATPase N-terminal 42 107 IPR032631 -
Prci5g1242 1195 SFLD C1.7: P-type atpase like 407 918 - -
Prci5g1242 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Prci5g1242 1195 PRINTS P-type cation-transporting ATPase superfamily signature 867 886 - -
Prci5g1242 1195 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Prci5g1242 1195 FunFam Phospholipid-transporting ATPase 544 702 - -
Prci5g1242 1195 Gene3D - 702 907 IPR023214 -
Prci5g1242 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 1156 - -
Prci5g1242 1195 FunFam Phospholipid-transporting ATPase 702 907 - -
Prci5g1242 1195 CDD P-type_ATPase_APLT_Dnf-like 58 1016 - -
Prci5g1242 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 501 671 IPR023299 GO:0000166
Prci5g1242 1195 SUPERFAMILY Calcium ATPase, transduction domain A 140 284 IPR008250 -
Prci5g1242 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1145 IPR023298 -
Prci5g1242 1195 Gene3D - 117 287 - -
Prci5g1242 1195 Gene3D - 547 701 IPR023299 GO:0000166
Prci5g1242 1195 NCBIfam HAD-IC family P-type ATPase 834 951 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci5g1242 1195 Pfam Cation transport ATPase (P-type) 535 628 - -
Prci5g1242 1195 NCBIfam phospholipid-translocating P-type ATPase 56 1152 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Prci5g1242 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 1145 IPR032630 -
Prci5g1242 1195 SFLD p-type atpase 407 918 IPR044492 -
Prci5g1242 1195 FunFam Phospholipid-transporting ATPase 117 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1242 Prci-Chr5 31591244 31598506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1242 10 1191 Primary Pumps ATPases AT1G68710 75.517 0.0 1941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1242 K01530 - qsa:O6P43_025645 1978.37