Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1233 ATGATGCCTCCTGAGCAAGAAACCACGACCGTACATGTGACGCCGTCCAGCATTCCGTCCATCCCCAACCGGCCACTGCCGGAGAAAAGCTCCGTTCACGCTGATCCAGGAGGTTCCGCCACTAACGACGACAAACCCAGTTCGGATAAATATGGCATTCCCCTTCATCAGCACCACCCGTCGTCAGCAACACGTTCCATAGTTCTTCACCAATCATTGCGACCCGTTACCCTCAAATTTGAAGACGTTTCTTACAGTATGACCTTTGGAAGCAAAAAGAATGGAGGTTGTTTTTCTTCGGATAACTCGAAACCGACCCGGACAATTCTCAACGGCGTGACTGGGACGGTCCGGCCTGGAGAATTGATGGCAATGCTGGGCCCGTCAGGCAGCGGCAAGACCACGCTACTCACAGCACTAGCTGGCCGGCTCGCCGGAAAAGTTTCCGGCAACATAACCTACAATGGCCTTCCTTTCTCTAGCTCCATGAAGCGCAGGACTGGTTTTGTCTCACAAGACGATGTGTTATACCCTCACCTCACTGTTCTTGAGTCGCTGGTTTATACGGCTTTGTTGAGACTTCCCAAAAGCCTCACCAAAGAAGAGAAAATAGAACAAGCTGAGATGGTTATCACGGAGCTTGGGTTAACCAGGTGCCGAAACACCGCCGTGGGTGGTGTTTCCGCCTTGTTTAGGGGAATCTCGGGTGGGGAGAGAAAACGGGTTAGTATTGGGCAGGAGATGCTTGTGAACCCGAGTCTGTTGTTGCTGGACGAACCCACCTCCGGGCTGGACTCGACGGCCGCTCAACGCATAGTGGCAGTGCTCCGGGGGATGGCACGGCGTGGCCGGACGGTGGTGACCACTATTCATCAGCCGTCAAGCAGGTTGTACACGATGTTTGACAAGGTCGTCGTACTATCCGACGGTTGCCCCATTTACGCAGGAGTATCGGGCCGGGTCATGGAGTATCTCGAGTCCATCGGGTTTCTGCCCACTATCAACTTCATGAACCCGGCTGATTTTCTGCTTGACCTTGCTAATGGCATTGTGGCTGATGTTAAGCTGGATGATCAGACTGACATGCAGGGCAGATTAGATCACATTGAAGATCAGTCTTCAATAAAACAGTCTCTGGTTTTATCCTATAAAAAGATTTTATATCCTGCTCTGAAAGAAGAGATTCAGCAAAATATTAGAGACACAGCTAGTTCAACACCAGGAACACCCGGACGAAGCTTAGAGAACCAGTGGAACACCAGCTGGTGGGAGCAATTCAAAGTTCTGCTTAAGAGGGGTTTACAAGAGAGGAGACATGAATCCTATTCAGGCTTAAGGATTTTCCAAGTCTTGTCTGTCTCAATTCTCTCAGGACTTCTCTGGTGGCATTCTGATCCTTCACACATACAAGATCAGGTAGGCCTGCTTTTCTTCTTCTCCATCTTCTGGGGATTCTTCCCTCTATTCAACGCCATCTTTGCGTTCCCTTTGGAGAGACCAATGCTGATAAAAGAAAGATCCTCGGGAATGTACCATCTTTCATCCTACTATATAGCCAGAATGGTAGGTGACCTACCCATGGAGCTTGTCCTTCCCACAATCTTTGTCACCATCAGCTACTGGATGGGTGGACTCAAGCATTCACTAATCACCTTTGTGTTAACACTCTTAATCACCATCTTAAATGTGCTAGTCTCTCAAGGAATAGGCCTAGCACTTGGAGCCATATTAATGGAAGTGAAGCAGGCCACAACCTTAGCTTCAGTGACCATGCTGGTGTTTCTGCTAGCTGGTGGCTACTACATTCAGCAGATGCCATCTTTCATAGCATGGTTGAAGTATATATCTTTCAGTCACTACTGCTATAAACTTCTGGTGGGAGTTCAGTACTCAGAAAATGAGGTTTACGATTGTGGATTAGGGTTGCATTGTAGGGTAGAGGATTTTCCTGCTATAAAGTGTCTTGGAGGTCTTGCTCATTTGTGGGGTGATGTGGCTGCATTGTGTGTGATGTTGATTGGATACAGAGTTGTGGCTTATGTGGCTTTGAGGATGAGGCAGCCTCACTGA 2070 0.487 MMPPEQETTTVHVTPSSIPSIPNRPLPEKSSVHADPGGSATNDDKPSSDKYGIPLHQHHPSSATRSIVLHQSLRPVTLKFEDVSYSMTFGSKKNGGCFSSDNSKPTRTILNGVTGTVRPGELMAMLGPSGSGKTTLLTALAGRLAGKVSGNITYNGLPFSSSMKRRTGFVSQDDVLYPHLTVLESLVYTALLRLPKSLTKEEKIEQAEMVITELGLTRCRNTAVGGVSALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTAAQRIVAVLRGMARRGRTVVTTIHQPSSRLYTMFDKVVVLSDGCPIYAGVSGRVMEYLESIGFLPTINFMNPADFLLDLANGIVADVKLDDQTDMQGRLDHIEDQSSIKQSLVLSYKKILYPALKEEIQQNIRDTASSTPGTPGRSLENQWNTSWWEQFKVLLKRGLQERRHESYSGLRIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYHLSSYYIARMVGDLPMELVLPTIFVTISYWMGGLKHSLITFVLTLLITILNVLVSQGIGLALGAILMEVKQATTLASVTMLVFLLAGGYYIQQMPSFIAWLKYISFSHYCYKLLVGVQYSENEVYDCGLGLHCRVEDFPAIKCLGGLAHLWGDVAALCVMLIGYRVVAYVALRMRQPH 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1233 689 Gene3D - 92 328 IPR027417 -
Prci5g1233 689 FunFam ABC transporter G family member 22 97 328 - -
Prci5g1233 689 MobiDBLite consensus disorder prediction 1 65 - -
Prci5g1233 689 Pfam ABC-2 type transporter 424 630 IPR013525 GO:0016020|GO:0140359
Prci5g1233 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 326 IPR027417 -
Prci5g1233 689 ProSitePatterns ABC transporters family signature. 234 248 IPR017871 GO:0005524|GO:0016887
Prci5g1233 689 Pfam ABC-2 type transporter 291 354 IPR043926 GO:0140359
Prci5g1233 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 334 IPR003439 GO:0005524
Prci5g1233 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 57 680 - -
Prci5g1233 689 SMART AAA_5 119 311 IPR003593 GO:0016887
Prci5g1233 689 Pfam ABC transporter 110 262 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1233 Prci-Chr5 31492505 31497631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1233 103 310 Calmodulin-binding Proteins AT2G36910 32.420 2.70e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1233 K05681 - gmx:100792991 985.711