Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1232 ATGATGCCTCCTGAGCAAGAAACCACGACCGTACATGTGACGCCGTCCAGCATTCCGTCCATCCCCAACCGGCCACTGCCGGAGAAAAGCTCCGTTCACGCTGATCCAGGAGGTTCCGCCACTAACGACGACAAACCCAGTTCGGATAAATATGGCATTCCCCTTCATCAGCACCACCCGTCGTCAGCAACACGTTCCATAGTTCTTCACCAATCATTGCGACCCGTTACCCTCAAATTTGAAGACGTTTCTTACAGTATGACCTTTGGAAGCAAAAAGAATGGAGGTTGTTTTTCTTCGGATAACTCGAAACCGACCCGGACAATTCTCAACGGCGTGACTGGGACGGTCCGGCCTGGAGAATTGATGGCAATGCTGGGCCCGTCAGGCAGCGGCAAGACCACGCTACTCACAGCACTAGCTGGCCGGCTCGCCGGAAAAGTTTCCGGCAACATAACCTACAATGGCCTTCCTTTCTCTAGCTCCATGAAGCGCAGGACTGGTTTTGTCTCACAAGACGATGTGTTATACCCTCACCTCACTGTTCTTGAGTCGCTGGTTTATACGGCTTTGTTGAGACTTCCCAAAAGCCTCACCAAAGAAGAGAAAATAGAACAAGCTGAGATGGTTATCACGGAGCTTGGGTTAACCAGGTGCCGAAACACCGCCGTGGGTGGTGTTTCCGCCTTGTTTAGGGGAATCTCGGGTGGGGAGAGAAAACGGGTTAGTATTGGGCAGGAGATGCTTGTGAACCCGAGTCTGTTGTTGCTGGACGAACCCACCTCCGGGCTGGACTCGACGGCCGCTCAACGCATAGTGGCAGTGCTCCGGGGGATGGCACGGCGTGGCCGGACGGTGGTGACCACTATTCATCAGCCGTCAAGCAGGTTGTACACGATGTTTGACAAGGTCGTCGTACTATCCGACGGTTGCCCCATTTACGCAGGAGTATCGGGCCGGGTCATGGAGTATCTCGAGTCCATCGGGTTTCTGCCCACTATCAACTTCATGAACCCGGCTGATTTTCTGCTTGACCTTGCTAATGGCATTGTGGCTGATGTTAAGCTGGATGATCAGACTGACATGCAGGGCAGATTAGATCACATTGAAGATCAGTCTTCAATAAAACAGTCTCTGGTTTTATCCTATAAAAAGATTTTATATCCTGCTCTGAAAGAAGAGATTCAGCAAAATATTAGAGACACAGCTAGTTCAACACCAGGAACACCCGGACGAAGCTTAGAGAACCAGTGGAACACCAGCTGGTGGGAGCAATTCAAAGTTCTGCTTAAGAGGGGTTTACAAGAGAGGAGACATGAATCCTATTCAGGCTTAAGGATTTTCCAAGTCTTGTCTGTCTCAATTCTCTCAGGACTTCTCTGGTGGCATTCTGATCCTTCACACATACAAGATCAGGTAATATGA 1425 0.5039 MMPPEQETTTVHVTPSSIPSIPNRPLPEKSSVHADPGGSATNDDKPSSDKYGIPLHQHHPSSATRSIVLHQSLRPVTLKFEDVSYSMTFGSKKNGGCFSSDNSKPTRTILNGVTGTVRPGELMAMLGPSGSGKTTLLTALAGRLAGKVSGNITYNGLPFSSSMKRRTGFVSQDDVLYPHLTVLESLVYTALLRLPKSLTKEEKIEQAEMVITELGLTRCRNTAVGGVSALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTAAQRIVAVLRGMARRGRTVVTTIHQPSSRLYTMFDKVVVLSDGCPIYAGVSGRVMEYLESIGFLPTINFMNPADFLLDLANGIVADVKLDDQTDMQGRLDHIEDQSSIKQSLVLSYKKILYPALKEEIQQNIRDTASSTPGTPGRSLENQWNTSWWEQFKVLLKRGLQERRHESYSGLRIFQVLSVSILSGLLWWHSDPSHIQDQVI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1232 474 CDD ABCG_EPDR 75 316 - -
Prci5g1232 474 Gene3D - 83 328 IPR027417 -
Prci5g1232 474 MobiDBLite consensus disorder prediction 1 65 - -
Prci5g1232 474 Pfam ABC-2 type transporter 291 355 IPR043926 GO:0140359
Prci5g1232 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 326 IPR027417 -
Prci5g1232 474 ProSitePatterns ABC transporters family signature. 234 248 IPR017871 GO:0005524|GO:0016887
Prci5g1232 474 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 57 473 - -
Prci5g1232 474 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 334 IPR003439 GO:0005524
Prci5g1232 474 FunFam ABC transporter G family member 22 97 328 - -
Prci5g1232 474 SMART AAA_5 119 311 IPR003593 GO:0016887
Prci5g1232 474 Pfam ABC transporter 110 262 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1232 Prci-Chr5 31492505 31497631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1232 103 310 Calmodulin-binding Proteins AT2G36910 32.420 3.91e-14 73.2