Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1208 ATGCAGTCCCACTTCATGATGGGGTCCTCCGACGATTATGTTCAAGCATTAGAATCTGAACGTCTTAAAATCCTTGTCTTCTCCAAAGAGCTTCCTCTCTCCTTGGACCTCGTTACCCGAGCCATTGAAGCGTTGAGGTCGAAGCATAATTTGAAGGGCCAATCGGAGTGTTCGGGACAGACATCATCGGAAGGGCCTGTTCTGGAGGAGTTCATACCCATCAAGAGAAGGGAAGACGATGAAGATGAGCAACACTCTCATCATCATCATCCCGCGATTAACAACTCCGATGAGACGAAATTGGATTGGCTTAGATCCGTACAACTCTGGAATATTCCTCAATCCCCAGTTCAAGAGAATGCTCCGAGGAAAACGTCGGTGTTGGAAGCAAACAGCAACGGAGGTGCTTTCCAGCCATTTCACAGAGAAGCGAGTGTTCCAAAGGCTAATTCATTAACAGGCAAAGCATCCTCTCCTCCTCCTCCTCCGCAGCCTCCAGTCGCCGGGAGCAACAAGAAAGAAGGACAGAGTCGAAGGAAGCAACGACGATGCTGGTCTCAGGAGATGCATAAGTGCTTCGTGGACGCACTTCAACAACTCGGTGGAGCAGATTTTGCAACGCCGAAGCAGATTAGGGGACTCATGAAGGTCGATGGCCTCACAAACGACGAAGTGAAGAGTCATTTACAGAAATATCGATTGCATACGAGGAGACCAAGTCACTTGATACAGAACAACAATGGCGACTCTCAAACGGCTCAATTTGTGTTGGTGAGGAGCATCATAGTTCAACCGCCGGAACATGAGCCGCCATTTGTGATTTATGCGCCGGTGGAGTCACAAGCACCGGCGGCGGTTCCGGTGAATGTTCAGAGGCCAGTAATGGGTTGTGAACGTTCAAATTCAGAAGAAAGAAGGAATCACAGCGAAGTCGCGGATCATCCAAATTCACCAGATTCATCTTCGTCGACTTTTCATACAACCACAGATTCGCCTCGCTGTTGA 1005 0.4896 MQSHFMMGSSDDYVQALESERLKILVFSKELPLSLDLVTRAIEALRSKHNLKGQSECSGQTSSEGPVLEEFIPIKRREDDEDEQHSHHHHPAINNSDETKLDWLRSVQLWNIPQSPVQENAPRKTSVLEANSNGGAFQPFHREASVPKANSLTGKASSPPPPPQPPVAGSNKKEGQSRRKQRRCWSQEMHKCFVDALQQLGGADFATPKQIRGLMKVDGLTNDEVKSHLQKYRLHTRRPSHLIQNNNGDSQTAQFVLVRSIIVQPPEHEPPFVIYAPVESQAPAAVPVNVQRPVMGCERSNSEERRNHSEVADHPNSPDSSSSTFHTTTDSPRC 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1208 334 SUPERFAMILY Homeodomain-like 178 238 IPR009057 -
Prci5g1208 334 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 10 313 IPR044787 GO:0003700|GO:0006355
Prci5g1208 334 FunFam Myb family transcription factor 179 237 - -
Prci5g1208 334 NCBIfam myb-like DNA-binding domain, SHAQKYF class 180 235 IPR006447 GO:0003677
Prci5g1208 334 MobiDBLite consensus disorder prediction 147 183 - -
Prci5g1208 334 MobiDBLite consensus disorder prediction 314 334 - -
Prci5g1208 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 177 237 IPR017930 -
Prci5g1208 334 MobiDBLite consensus disorder prediction 298 313 - -
Prci5g1208 334 Gene3D - 179 237 - -
Prci5g1208 334 MobiDBLite consensus disorder prediction 293 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1208 Prci-Chr5 31148127 31149934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1208 13 263 G2-like Transcription Factor Family AT1G13300 47.015 9.72e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci5g1208 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1208 - - pcin:129310266 636.336