Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1177 ATGTATCAGAAGGGAATCATGGCTGCCGGTGCCGCTACTGAGAATTGGGGTGATTCCAGCATGAGTACATGTATGGCAACTGGACATCAAGTTCATTCTGTGGTTGGAAATGGTGCCTTGACATTTGACATGGACTATGAGCGCTGGGTCAATGAGCATCAGCAACTGATAAATGACCTGAGACAAGCTTTTAATTCCCAAAAGGGGGATGATGATCTGCATATTGTTGTTGAGGGTGTGACAGCACATTATGATGAATTATTGAGGTTAAAGATCATCGGGGCAAAAGCTGATGTGTTTCACATGTTCAATGGTATGTGGAAGACGCCCGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCGTCTGAACTTTTGAAGATATTGAGGAACCAGCTTGAGCCATTACCAGAGCAGCAATTGATGGGCTTGTATAATTTGCAGCATTCTTCATTGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCATCAATCTCTTTCTAGGATACTTTCTGACTCTTCAACCTCACTCGGATCCACTAGTTCTGGAAATTCTGCCCAATTCAATATGGGTCAAATAATGGATCTTGCTATGACCAAGCTTCACTCTTTAGAGGATTTTCTTCTTGCGGCTGATATTTTAAGGCAGCAAACTGTGCGACAGCTGCAAAGAATCTTGAGCACGCGACAAGCAGCTCGAGCCCTCCTTGTCATCAATGATTTCGTTTCCCAACTACGAAATGTAAAATGCTTCAGGCCTACAAATCTTCGTAGGCTGGCTCAGAATCATCAAGAGGCTACGAGGAAGGGTCGGTCTGGGAAAAAGGGTATACTTGTTACAATTGAATATCCTAATAAGGATCATTCTCATTCAGTGGTTGAAAATGGTGCCTCCGCATTCGACATGGACTATGAGCGTTGGGTAGAAGAGCACCAACATGTGATCAACAACCTAAGAAAAGCTTTCAATTCTCAAATGGGAGAAGATAATAAGGATGAACTACACATCGCTATCGTGGGCGTTACATCACATTACGAAGAATTATCAAGGTTAAAGAGCATGGGGACAAAGGCTGACGTATTTCACATGCTCTCTGGTACGTGGAAGACGCCTGTTGAAAGATGTTTTATGTGGTTGGGTGGATTCCGATCATCTGAACTCGTCAAGATAATAATGAAAGAGCAGCTAGAGGCATTAACAGAGGAGGAATTGGGGGGGATGTATAATCTGCAGCAGGCTTCGTGGCAACTTGAGGATGCTTTATCACAAGCCATGCAGGTATTACAACAATCTCTTGTAGAGACACTTTGCTCCAACTCGTTCGGCCTCGAACACTCCGGTTCTGAATACAGTACGAGTCAAATGGCACTTGCAATGAGCAAGCTTGCCTCATTGGAGAGTATAGTTCTCCAGGCTGAATTGTTGAGGCAACAAACTCTGAAAGAGTTGCAAAGAATCTTGAGGACACGACAAGCAGCACGTGCATTCCTTGTGATCAATGACTACATCTCTCGACTACGAAATGTTAAAACTGCAAGCTCTCCAGTCGAGGGCATGCCATCGAACTTGCACCAGAAACTAGCTACTTCAATGAATCTGCACCAAGAAGATGACCAACTGATGAAGAAGAATCAAATTAAAGCAGTGAAGCTTCATGGAGGAAGATCCAAGTTGCTGATGAAGAATAAAGCAAATGGTCATTTGAAGTCACCGTCAAAAGGGTTGGGTGAGAAAAGGAGATGTGTTGTGTTTGAAATCTCGTTTTAG 1779 0.4356 MYQKGIMAAGAATENWGDSSMSTCMATGHQVHSVVGNGALTFDMDYERWVNEHQQLINDLRQAFNSQKGDDDLHIVVEGVTAHYDELLRLKIIGAKADVFHMFNGMWKTPAERCFMWLGGFRSSELLKILRNQLEPLPEQQLMGLYNLQHSSLQAEDALSQGMEALHQSLSRILSDSSTSLGSTSSGNSAQFNMGQIMDLAMTKLHSLEDFLLAADILRQQTVRQLQRILSTRQAARALLVINDFVSQLRNVKCFRPTNLRRLAQNHQEATRKGRSGKKGILVTIEYPNKDHSHSVVENGASAFDMDYERWVEEHQHVINNLRKAFNSQMGEDNKDELHIAIVGVTSHYEELSRLKSMGTKADVFHMLSGTWKTPVERCFMWLGGFRSSELVKIIMKEQLEALTEEELGGMYNLQQASWQLEDALSQAMQVLQQSLVETLCSNSFGLEHSGSEYSTSQMALAMSKLASLESIVLQAELLRQQTLKELQRILRTRQAARAFLVINDYISRLRNVKTASSPVEGMPSNLHQKLATSMNLHQEDDQLMKKNQIKAVKLHGGRSKLLMKNKANGHLKSPSKGLGEKRRCVVFEISF 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1177 592 ProSiteProfiles DOG1 domain profile. 39 259 IPR025422 GO:0006351|GO:0043565
Prci5g1177 592 Pfam Seed dormancy control 319 396 IPR025422 GO:0006351|GO:0043565
Prci5g1177 592 Pfam Seed dormancy control 57 131 IPR025422 GO:0006351|GO:0043565
Prci5g1177 592 ProSiteProfiles DOG1 domain profile. 301 520 IPR025422 GO:0006351|GO:0043565
Prci5g1177 592 PANTHER TRANSCRIPTION FACTOR TGA9 22 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1177 Prci-Chr5 30770092 30776816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1177 212 515 bZIP Transcription Factor Family AT1G68640 49.206 1.05e-75 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1177 K14431 - pcin:129311019 1145.95