Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1176 ATGTATCAGAAGGGAATCATGGCTGCCGGTGCCGCTACTGAGAATTGGGGTGATTCCAGCATGAGTACATGTATGGCAACTGGACATCAAGTTCATTCTGTGGTTGGAAATGGTGCCTTGACATTTGACATGGACTATGAGCGCTGGGTCAATGAGCATCAGCAACTGATAAATGACCTGAGACAAGCTTTTAATTCCCAAAAGGGGGATGATGATCTGCATATTGTTGTTGAGGGTGTGACAGCACATTATGATGAATTATTGAGGTTAAAGATCATCGGGGCAAAAGCTGATGTGTTTCACATGTTCAATGGTATGTGGAAGACGCCCGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCGTCTGAACTTTTGAAGATATTGAGGAACCAGCTTGAGCCATTACCAGAGCAGCAATTGATGGGCTTGTATAATTTGCAGCATTCTTCATTGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCATCAATCTCTTTCTAGGATACTTTCTGACTCTTCAACCTCACTCGGATCCACTAGTTCTGGAAATTCTGCCCAATTCAATATGGGTCAAATAATGGATCTTGCTATGACCAAGCTTCACTCTTTAGAGGATTTTCTTCTTGCGGCTGATATTTTAAGGCAGCAAACTGTGCGACAGCTGCAAAGAATCTTGAGCACGCGACAAGCAGCTCGAGCCCTCCTTGTCATCAATGATTTCGTTTCCCAACTACGAAATAATCTTCGTAGGCTGGCTCAGAATCATCAAGAGGCTACGAGGAAGGGTCGGTCTGGGAAAAAGGGTATACTTGTTACAATTGAATATCCTAATAAGGATCATTCTCATTCAGTGGTTGAAAATGGTGCCTCCGCATTCGACATGGACTATGAGCGTTGGGTAGAAGAGCACCAACATGTGATCAACAACCTAAGAAAAGCTTTCAATTCTCAAATGGGAGAAGATAATAAGGATGAACTACACATCGCTATCGTGGGCGTTACATCACATTACGAAGAATTATCAAGGTTAAAGAGCATGGGGACAAAGGCTGACGTATTTCACATGCTCTCTGGTACGTGGAAGACGCCTGTTGAAAGATGTTTTATGTGGTTGGGTGGATTCCGATCATCTGAACTCGTCAAGATAATAATGAAAGAGCAGCTAGAGGCATTAACAGAGGAGGAATTGGGGGGGATGTATAATCTGCAGCAGGCTTCGTGGCAACTTGAGGATGCTTTATCACAAGCCATGCAGGTATTACAACAATCTCTTGTAGAGACACTTTGCTCCAACTCGTTCGGCCTCGAACACTCCGGTTCTGAATACAGTACGAGTCAAATGGCACTTGCAATGAGCAAGCTTGCCTCATTGGAGAGTATAGTTCTCCAGGCTGAATTGTTGAGGCAACAAACTCTGAAAGAGTTGCAAAGAATCTTGAGGACACGACAAGCAGCACGTGCATTCCTTGTGATCAATGACTACATCTCTCGACTACGAAATGTTAAAACTGCAAGCTCTCCAGTCGAGGGCATGCCATCGAACTTGCACCAGAAACTAGCTACTTCAATGAATCTGCACCAAGAAGATGACCAACTGATGAAGAAGAATCAAATTAAAGCAGTGAAGCTTCATGGAGGAAGATCCAAGTTGCTGATGAAGAATAAAGCAAATGGTCATTTGAAGTCACCGTCAAAAGGGTTGGGTGAGAAAAGGAGATGTGTTGTGTTTGAAATCTCGTTTTAG 1758 0.4357 MYQKGIMAAGAATENWGDSSMSTCMATGHQVHSVVGNGALTFDMDYERWVNEHQQLINDLRQAFNSQKGDDDLHIVVEGVTAHYDELLRLKIIGAKADVFHMFNGMWKTPAERCFMWLGGFRSSELLKILRNQLEPLPEQQLMGLYNLQHSSLQAEDALSQGMEALHQSLSRILSDSSTSLGSTSSGNSAQFNMGQIMDLAMTKLHSLEDFLLAADILRQQTVRQLQRILSTRQAARALLVINDFVSQLRNNLRRLAQNHQEATRKGRSGKKGILVTIEYPNKDHSHSVVENGASAFDMDYERWVEEHQHVINNLRKAFNSQMGEDNKDELHIAIVGVTSHYEELSRLKSMGTKADVFHMLSGTWKTPVERCFMWLGGFRSSELVKIIMKEQLEALTEEELGGMYNLQQASWQLEDALSQAMQVLQQSLVETLCSNSFGLEHSGSEYSTSQMALAMSKLASLESIVLQAELLRQQTLKELQRILRTRQAARAFLVINDYISRLRNVKTASSPVEGMPSNLHQKLATSMNLHQEDDQLMKKNQIKAVKLHGGRSKLLMKNKANGHLKSPSKGLGEKRRCVVFEISF 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1176 585 ProSiteProfiles DOG1 domain profile. 294 513 IPR025422 GO:0006351|GO:0043565
Prci5g1176 585 ProSiteProfiles DOG1 domain profile. 39 259 IPR025422 GO:0006351|GO:0043565
Prci5g1176 585 PANTHER TRANSCRIPTION FACTOR TGA9 22 251 - -
Prci5g1176 585 Pfam Seed dormancy control 312 389 IPR025422 GO:0006351|GO:0043565
Prci5g1176 585 Pfam Seed dormancy control 57 131 IPR025422 GO:0006351|GO:0043565
Prci5g1176 585 Coils Coil 246 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1176 Prci-Chr5 30770092 30776816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1176 212 508 bZIP Transcription Factor Family AT1G68640 50.325 1.17e-77 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1176 K14431 - pcin:129311019 1123.23