Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1175 ATGTATCAGAAGGGAATCATGGCTGCCGGTGCCGCTACTGAGAATTGGGGTGATTCCAGCATGAGTACATGTATGGCAACTGGACATCAAGTTCATTCTGTGGTTGGAAATGGTGCCTTGACATTTGACATGGACTATGAGCGCTGGGTCAATGAGCATCAGCAACTGATAAATGACCTGAGACAAGCTTTTAATTCCCAAAAGGGGGATGATGATCTGCATATTGTTGTTGAGGGTGTGACAGCACATTATGATGAATTATTGAGGTTAAAGATCATCGGGGCAAAAGCTGATGTGTTTCACATGTTCAATGGTATGTGGAAGACGCCCGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCGTCTGAACTTTTGAAGATATTGAGGAACCAGCTTGAGCCATTACCAGAGCAGCAATTGATGGGCTTGTATAATTTGCAGCATTCTTCATTGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCATCAATCTCTTTCTAGGATACTTTCTGACTCTTCAACCTCACTCGGATCCACTAGTTCTGGAAATTCTGCCCAATTCAATATGGGTCAAATAATGGATCTTGCTATGACCAAGCTTCACTCTTTAGAGGATTTTCTTCTTGCGGCTGATATTTTAAGGCAGCAAACTGTGCGACAGCTGCAAAGAATCTTGAGCACGCGACAAGCAGCTCGAGCCCTCCTTGTCATCAATGATTTCGTTTCCCAACTACGAAATGTAAAATGCTTCAGGCCTACAAATCTTCGTAGGCTGGCTCAGAATCATCAAGAGGCTACGAGGAAGGGTCGGTCTGGGAAAAAGGGTATACTTGTTACAATTGAATATCCTAATAAGGATCATTCTCATTCAGTGGTTGAAAATGGTGCCTCCGCATTCGACATGGACTATGAGCGTTGGGTAGAAGAGCACCAACATGTGATCAACAACCTAAGAAAAGCTTTCAATTCTCAAATGGGAGAAGATAATAAGGATGAACTACACATCGCTATCGTGGGCGTTACATCACATTACGAAGAATTATCAAGGTTAAAGAGCATGGGGACAAAGGCTGACGTATTTCACATGCTCTCTGGTACGTGGAAGACGCCTGTTGAAAGATGTTTTATGTGGTTGGGTGGATTCCGATCATCTGAACTCGTCAAGATAATAATGAAAGAGCAGCTAGAGGCATTAACAGAGGAGGAATTGGGGGGGATGTATAATCTGCAGCAGGCTTCGTGGCAACTTGAGGATGCTTTATCACAAGCCATGCAGGCTGAATTGTTGAGGCAACAAACTCTGAAAGAGTTGCAAAGAATCTTGAGGACACGACAAGCAGCACGTGCATTCCTTGTGATCAATGACTACATCTCTCGACTACGAAATGTTAAAACTGCAAGCTCTCCAGTCGAGGGCATGCCATCGAACTTGCACCAGAAACTAGCTACTTCAATGAATCTGCACCAAGAAGATGACCAACTGATGAAGAAGAATCAAATTAAAGCAGTGAAGCTTCATGGAGGAAGATCCAAGTTGCTGATGAAGAATAAAGCAAATGGTCATTTGAAGTCACCGTCAAAAGGGTTGGGTGAGAAAAGGAGATGTGTTGTGTTTGAAATCTCGTTTTAG 1644 0.4337 MYQKGIMAAGAATENWGDSSMSTCMATGHQVHSVVGNGALTFDMDYERWVNEHQQLINDLRQAFNSQKGDDDLHIVVEGVTAHYDELLRLKIIGAKADVFHMFNGMWKTPAERCFMWLGGFRSSELLKILRNQLEPLPEQQLMGLYNLQHSSLQAEDALSQGMEALHQSLSRILSDSSTSLGSTSSGNSAQFNMGQIMDLAMTKLHSLEDFLLAADILRQQTVRQLQRILSTRQAARALLVINDFVSQLRNVKCFRPTNLRRLAQNHQEATRKGRSGKKGILVTIEYPNKDHSHSVVENGASAFDMDYERWVEEHQHVINNLRKAFNSQMGEDNKDELHIAIVGVTSHYEELSRLKSMGTKADVFHMLSGTWKTPVERCFMWLGGFRSSELVKIIMKEQLEALTEEELGGMYNLQQASWQLEDALSQAMQAELLRQQTLKELQRILRTRQAARAFLVINDYISRLRNVKTASSPVEGMPSNLHQKLATSMNLHQEDDQLMKKNQIKAVKLHGGRSKLLMKNKANGHLKSPSKGLGEKRRCVVFEISF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1175 547 ProSiteProfiles DOG1 domain profile. 39 259 IPR025422 GO:0006351|GO:0043565
Prci5g1175 547 Pfam Seed dormancy control 319 396 IPR025422 GO:0006351|GO:0043565
Prci5g1175 547 Pfam Seed dormancy control 57 131 IPR025422 GO:0006351|GO:0043565
Prci5g1175 547 ProSiteProfiles DOG1 domain profile. 301 506 IPR025422 GO:0006351|GO:0043565
Prci5g1175 547 PANTHER TRANSCRIPTION FACTOR TGA9 430 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1175 Prci-Chr5 30770092 30776818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1175 212 470 bZIP Transcription Factor Family AT1G68640 40.823 9.52e-58 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1175 K14431 - pcin:129311019 1042.34