Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1173 ATGCAAAGCTTCAAGACTGCTCAGTCCACCCCACAGCAACTCTATTGCCACCCTTCCTTCTTTCTTCGGGGTGATGATGCCGGCCGAAATCCTGCGCGTTTCTCCGATCTTGGAGAGCTTCATCATTCCGTTTCTCCTTTTCAGCATGAGGATGCTGTTGATTTAAGCTCAAGCTCTATGTTTACTGTAAAGTCCAGCAATGTCGCTGTTGTTCCTATTAACTTGCAGTACGGGACATTGAGCTCGAACATCGGGTCTTCAGAAATTGCTTCAACAGGAGCTGGGTGCCTGGATACAGGGCAGCATCTCATGTATCAGAAGGGAATCGCGGCTGCGCCGGCCGCCGTGCCGGTCGGGAACGGACATATGGAGAATTGGGGTGATTCCGGCATGGTGGATAATAGTCAACACACTGATACTTCCACAGATATCGACCCCGATGATAAAAACCTATGTAATAGAAGTCAGCCTGGGAGAGCCGTGGTTGCGGATTCCATAGATCAATCTAAGGCCAAACCGGAGGATCCGAAGACTCTTCGTAGGCTCGCTCAGAATCGAGAGGCTGCGAGGAAGAGTCGGTTGAGGAAAAAGGCATATGTACAGCAGTTGGAGAACAGTCGTCTCAGACTAGCACAACTGGAGCAAGAGCTTCAACGCGCGCGACAGCAGGGAATGCTTGTTGCAGGTGGATTTCCTGGGGATCATGGTCATTCAGTGGTTGGAAATGGTGCCTTGGCATTTGACATGGACTATGCGCGTTGGACCGATGAGCATCAACAACTGATCAATGACCTAAGAACGGCGGTTAATTCTCAAATGGGAGATAATGAACTGCATATTGTTGTTGAGGGTGTTACAGCTCATTATGACGAGTTATTTAGGTTAAAAAGCATAGGGGCAAAGGCTGATGTATTTCACATTCTCTATGGTATGTGGAAGACGCCTGCAGAAAGATGTTTTATGTGGTTAGGTGGGTTTCGATCGTCTGAACTTTTGAAGCAGTCTTCGTTGCAGGCTGAGGATGCTTTATCACAAGGCATGGAAGCATTGCATCAATCTCTTTCAGATACACTTTCCTCAACCTTCCTCGGACCAACCGGTACTGGAAACGTCGCCGAATACATGAGTCAAATGGCACTTGCTATGAGCAAGCTTGCCACATTGGAGAGTTTCCTCCATCAGGCTGATCTCTTGAGGCAACAAACACTGCAACAGCTGCAAAAAATCCTGACAACGCGACAAGTAGCACGCTCATTCGTTATCGTAAATGACTACATTTCGCGACTGCGAGCACTTAGTTCGTTATGGTTAGCTCGCCCTAGAGAGTAG 1329 0.4823 MQSFKTAQSTPQQLYCHPSFFLRGDDAGRNPARFSDLGELHHSVSPFQHEDAVDLSSSSMFTVKSSNVAVVPINLQYGTLSSNIGSSEIASTGAGCLDTGQHLMYQKGIAAAPAAVPVGNGHMENWGDSGMVDNSQHTDTSTDIDPDDKNLCNRSQPGRAVVADSIDQSKAKPEDPKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGMLVAGGFPGDHGHSVVGNGALAFDMDYARWTDEHQQLINDLRTAVNSQMGDNELHIVVEGVTAHYDELFRLKSIGAKADVFHILYGMWKTPAERCFMWLGGFRSSELLKQSSLQAEDALSQGMEALHQSLSDTLSSTFLGPTGTGNVAEYMSQMALAMSKLATLESFLHQADLLRQQTLQQLQKILTTRQVARSFVIVNDYISRLRALSSLWLARPRE 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1173 442 SUPERFAMILY Leucine zipper domain 177 220 IPR046347 GO:0003700|GO:0006355
Prci5g1173 442 FunFam BZIP family transcription factor 176 225 - -
Prci5g1173 442 Pfam bZIP transcription factor 177 215 IPR004827 GO:0003700|GO:0006355
Prci5g1173 442 ProSiteProfiles DOG1 domain profile. 244 439 IPR025422 GO:0006351|GO:0043565
Prci5g1173 442 MobiDBLite consensus disorder prediction 121 180 - -
Prci5g1173 442 SMART brlzneu 173 226 IPR004827 GO:0003700|GO:0006355
Prci5g1173 442 CDD bZIP_HBP1b-like 177 224 - -
Prci5g1173 442 Pfam Seed dormancy control 262 333 IPR025422 GO:0006351|GO:0043565
Prci5g1173 442 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 180 195 IPR004827 GO:0003700|GO:0006355
Prci5g1173 442 Coils Coil 196 223 - -
Prci5g1173 442 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 219 IPR004827 GO:0003700|GO:0006355
Prci5g1173 442 Gene3D - 176 226 - -
Prci5g1173 442 PANTHER TRANSCRIPTION FACTOR TGA9 120 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1173 Prci-Chr5 30730218 30733602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1173 3 442 bZIP Transcription Factor Family AT1G68640 56.356 1.09e-154 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci5g1173 DOG1 2.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1173 K14431 - qsa:O6P43_032773 603.208