Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1161 ATGAATTTCCCCAAAGCCAAAACGGTAAAGCAAAAGCCTCATCTCGCCCCTGCTCGAAAGAAGCCAGTAATGTCCAGAAAACTGCGTATAGTTTATAACGATCCTGAAGCCACAGACTCATCTTCAAGCGAAGATGAAGAAGAAGAGTGGGGAAACAGAAAGCTGAAGAGGATAAAACGATGTGTTCAGGAGCTCACCCTTCCTGTAGCTCCTGAGAAACCGGTGACGGTTGAAACTGACAGCTCTATTCTTACCATTAATGGCAAGGGGCGCAAAGAATGGGAACCAGTTAAACCCAAACCACAAAGGAGACGTTCGTCTTCGCAATACAGAGGCGTTCGACTCAGAAACTCGGGGAAATGGGCTGCGGAGATTCGACATCCTATCAAAGGTCGAAAATGGTTGGGTACTTTTGATACTCCAGAGGAGGCTTCTCAAGCTTATGAGGCCAAAAGAAGAGAGTTTGAAGCCATGGATTTCTCTAAGAAGAGAACTATTTCTGCAACTGTTTCTTCGGATTCATCTTCTTCAGCAGAGGACTCAGGCAGTGTTATGTCTCAGTCATCACCACCCTCTGTTCTTCAAGTGTATACTTCGATCGAGAATGGTCGCATTTCCAGAAAAGAAATCGATCATTTTGAGTCTGCGCTTGAAGCTTTGCAAATGCCTGATTCGATCTTGTCGACATCCGAGGATTACAAGACCTCAAGCAAAGAAGATAATGATTTAGAGTCTGGATTTACGGCTTTGCAAGTGCCTGACCTGGGTTCAAGCAAAGAAGCCAGTGATTTGACTTCTGAACTGGAAGCAACCATGGAAATAACCGATTTGAGTTTGCCAGAAGTGCCAATCCCAGCTTGTTCAGAGCCTTACATGTTTGAGCTGGATTGTTTAATGGTGAATGATTTGGAACAGACTTTTGAAGACGACGATGATCTTCGTGGGCAGCTAGGCAGTGGAATTTGTGGGTTTAACGATGATGTGCCTTGTGAGCTTCCTGATTTTGATTTTGACGATTTTGGTGCAGATGATGAGTTTGCCGGTTGGATTGAGGAACCCCTCAACATACCTTGTGCATGA 1080 0.4481 MNFPKAKTVKQKPHLAPARKKPVMSRKLRIVYNDPEATDSSSSEDEEEEWGNRKLKRIKRCVQELTLPVAPEKPVTVETDSSILTINGKGRKEWEPVKPKPQRRRSSSQYRGVRLRNSGKWAAEIRHPIKGRKWLGTFDTPEEASQAYEAKRREFEAMDFSKKRTISATVSSDSSSSAEDSGSVMSQSSPPSVLQVYTSIENGRISRKEIDHFESALEALQMPDSILSTSEDYKTSSKEDNDLESGFTALQVPDLGSSKEASDLTSELEATMEITDLSLPEVPIPACSEPYMFELDCLMVNDLEQTFEDDDDLRGQLGSGICGFNDDVPCELPDFDFDDFGADDEFAGWIEEPLNIPCA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1161 359 Gene3D AP2/ERF domain 108 161 IPR036955 GO:0003700|GO:0006355
Prci5g1161 359 ProSiteProfiles AP2/ERF domain profile. 109 169 IPR001471 GO:0003700|GO:0006355
Prci5g1161 359 MobiDBLite consensus disorder prediction 1 53 - -
Prci5g1161 359 CDD AP2 108 150 IPR001471 GO:0003700|GO:0006355
Prci5g1161 359 MobiDBLite consensus disorder prediction 80 113 - -
Prci5g1161 359 SMART rav1_2 109 176 IPR001471 GO:0003700|GO:0006355
Prci5g1161 359 SUPERFAMILY DNA-binding domain 108 155 IPR016177 GO:0003677
Prci5g1161 359 MobiDBLite consensus disorder prediction 12 26 - -
Prci5g1161 359 MobiDBLite consensus disorder prediction 164 193 - -
Prci5g1161 359 PRINTS Ethylene responsive element binding protein signature 131 147 IPR001471 GO:0003700|GO:0006355
Prci5g1161 359 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Prci5g1161 359 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 24 230 - -
Prci5g1161 359 Pfam AP2 domain 109 157 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1161 Prci-Chr5 30518013 30519521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1161 17 358 AP2-EREBP Transcription Factor Family AT1G68550 32.022 7.52e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1161 - - pcin:129311407 678.322