Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1152 ATGAGACTCAGCTGCAACGGTTGCCGCATTCTCCGAAAAGGCTGCACCGACTCCTGCATCATCCGGCCTTGCCTCCAATGGATCCATTCTCCTGAATCTCAGGCCAACGCCACCCTCTTTCTCGCCAAATTCTACGGCCGCGCCGGCCTCCTCAACCTCCTCCACGCCGCCCCGCCTCACCTCGGCCCAGCTGTGTTCAAGTCGTTGCTGTATGAGTCTTGTGGGAGGATTGTTAATCCGGTGTATGGCTCGATGGGTTTGTTCTGGAATGGGGAGTGGGATCGCTGCCAGGCCGCCGTGGATGCGGTGATGATGGGGTCGGAGATCAACAGCGTCGTGGCGGTTTCTTCGGATTCGCAAGGGGCTGATCTAGGTGTTTTCGCTGCGTGCGATATACGGCACGTGGCGAGAGATCAGGGGCAGGTTGGGGAGACGGAGAAGGAGCAGGAGAAAGACGAGTTGAGTAAGGTGAGAGGGAAGGGCCGGTTCAAGAGGAGTGGGAAGGTGATAAAGCCGAAGGCGCGAGTGGGTTGGGTCGATTCGTCGGCGCTGTGGAAGCCGGTTCAGGAATTTTCGGAGAGCGAAAGCGCGTTCTCTGGGGAAACTGTGGAGGCCAGCTTGGCGAACCGGTTGGGGTATAATGGAGATCAAGATGCGAACCGAACCAGAAAAGAGCCAGTTAATCTGAATTTGAGTCTTGGACAGGAGTAA 711 0.571 MRLSCNGCRILRKGCTDSCIIRPCLQWIHSPESQANATLFLAKFYGRAGLLNLLHAAPPHLGPAVFKSLLYESCGRIVNPVYGSMGLFWNGEWDRCQAAVDAVMMGSEINSVVAVSSDSQGADLGVFAACDIRHVARDQGQVGETEKEQEKDELSKVRGKGRFKRSGKVIKPKARVGWVDSSALWKPVQEFSESESAFSGETVEASLANRLGYNGDQDANRTRKEPVNLNLSLGQE 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1152 236 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Prci5g1152 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 207 - -
Prci5g1152 236 MobiDBLite consensus disorder prediction 140 160 - -
Prci5g1152 236 MobiDBLite consensus disorder prediction 212 236 - -
Prci5g1152 236 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1152 Prci-Chr5 30326463 30327751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1152 1 165 AS2 family AT1G68510 57.485 6.19e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci5g1152 LOB 1.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1152 - - pcin:129310290 463.381