Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1145 ATGAGGCTTCCGTTCTTCTCTATACCTCAGTCTCACCATTGCTCTGTTCCTAATAACTTTCAGGGTTCTTCGCTTGCCCTCTTCCCTGCCACGTCCTCTTCTTCTTCCCGCAGGCCTCGCTGGCCACGATGGACGCTGACTCTGCCTACCCGCCACCGCAGGAAAGATAAGGTGGTTCTCATAATGGGTGCTACTGGCAGCGGGAAGTCTCGCCTGTCCATCGACCTCGCCACCCGCTGCGCCTGCTCGGAAGTTATCAACGCAGACAAAATGCAAGTTTACAGGGGACTCGACATCACCACCAACAAGATTCCTTTGGGTGAACGAAACGGCGTCCCGCACCACCTGCTCGGAGATGTTGACCCTGCGAACGGAGAGTTCTTGCCGTCGGATTTTCGCTCAGTCGCCGGGTCCATTGTTTCCGATATCAGCTCGAGGAGGAAGCTTCCCATCGTCGTCGGTGGGTCCAACTCGTTGATTCATGCTCTTCTGGTGGAACAGTTTGACCCGGCGTTAAATGTGTTCGATGATGGTACGTCGTCACCGAGCTCGATCTCGTCCGAGTTAAGGTACAACTGTTGCATCCTCTGGGTGGACGTGTCTTTTCCTGTGTTATCGGATTACTTGATGAAGCGAGTTGACGACATGCTTGACTTGGGAATGGTGGATGAGCTCGCTCACTTCTTCGACCCGGAAGCGAGCGACTTAGAAGACGACTCAGAGCACAGATTTGGGTTGAGGAAAGCCATTGGAGTACCTGAATTCGATCAGTATTTCAAGCGATACCCACCACCGGGTGGGCTGAGGCGGGTCAAGGGAGATGAGGATCGGATGCGGCAGGCCGCATACGAAGAGGCAGTGATGGCGATAAAGGAAACTCGTCGGCTAGCGAAAAGGCAAATAGGGAAGATCATGCGGCTTAAAGGTGCCGGGTGGGACCTACAGAGGCTGGACGCCACAGAGGCGTTCCAGGCGGCGATGACGCCGTTGAGATGCTCCGACAACGGCGGCAAGAAATGGTCGGATATTTGGGAGAGACAGGTGGCAGAGCCAAGCGTGAAGATTGTGAAGAGGTTCTTGAAGGAGTAG 1089 0.5464 MRLPFFSIPQSHHCSVPNNFQGSSLALFPATSSSSSRRPRWPRWTLTLPTRHRRKDKVVLIMGATGSGKSRLSIDLATRCACSEVINADKMQVYRGLDITTNKIPLGERNGVPHHLLGDVDPANGEFLPSDFRSVAGSIVSDISSRRKLPIVVGGSNSLIHALLVEQFDPALNVFDDGTSSPSSISSELRYNCCILWVDVSFPVLSDYLMKRVDDMLDLGMVDELAHFFDPEASDLEDDSEHRFGLRKAIGVPEFDQYFKRYPPPGGLRRVKGDEDRMRQAAYEEAVMAIKEXTRRLAKRQIGKIMRLKGAGWDLQRLDATEAFQAAMTPLRCSDNGGKKWSDIWERQVAEPSVKIVKRFLKE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1145 363 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 202 315 - -
Prci5g1145 363 Pfam IPP transferase 185 302 - -
Prci5g1145 363 Pfam IPP transferase 92 166 - -
Prci5g1145 363 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 55 361 IPR039657 -
Prci5g1145 363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 237 IPR027417 -
Prci5g1145 363 Gene3D - 55 361 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1145 Prci-Chr5 30174744 30177005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1145 61 362 C2H2 Transcription Factor Family AT2G27760 27.621 2.00e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1145 K10760 - qsa:O6P43_025717 457.603