Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1136 ATGGGGACGGGTTCCAAGATCGATGGACCTTCTACCCCATCAATTCGACGAGACCCTTATGAGGTATTGTCAGTGTCAAAGGATGCAAATGATCAGGAAATAAAAACGGCTTACAGAAAGCTCGCTCTCAAGTATCACCCTGACAAGAATGCTAACAATCCTGAAGCATCAGAACTATTTAAAGAGGTTTCATATTCTTACAACATCTTATCTGATCCAGAGAAGAGAAGGCAGTATGACAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACATGGAAATCGATTTATCAAATCTTGGAACTGTTAACACAATGTTTGCAGCATTATTCAGCAAGCTGGGTGTCCCTATCAAGACTACCATTTCAGCAAATGTTCTTGAAGAAGCCCTGAATGGCACAGTTACAGTTAGACCCCTTCCTATTGGAACGTCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAAGCTGAGGAAGGGATTGTAGTGAGAGTTACTTCAACTGCACAAAGCAAATTCAAACTTCTCTACTTTGAACATGATGCAAATGGTGGGTATGGCTTGGCGTTACAGGTAGATAGCGAGAAGACTGGCAAGGTGACATCCGCTGGCATGTATTTCTTACATTTTCAAGTATACAGAATGGATTCAACTGTGAATGCATTGGCTATGGCGAAGGATCCTGAAGCAGCTTTCTTCAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGAATTAAAGCCTGGCACTCAATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCTGCCTATACAATCGTCGAGGCTCTTTGTGCAAAATCTTATGAGGATACTTCACAAAAACTTAAGGACATTGAAGCTCAAATTCTTAGAAAGAGGAATGATTTGCGCCAATTTGAATCAGAATACAGAAAGGCATTGGCACGCTATCAAGAGGTGAGAAGATATGCTCAAGAAAAACAATCAGTGGATGAACTTCTGAAACTGAGAGACACTATCCATTCCTCCTTCACTGTTGCTAAGTCTGTCTCTGTTAGTGGGAATAGTAGTAATTTGAGCAATGGAAGTAGTAGCAAGATCGCGGGCGAGGATTCCAAAGTTGAGAGCCCTGTGGAAGATGGAAGCTCAGATGGCAAGGATAAATCAGGCAAAAAGAAATGGTTCAACCTCAATCTCAAGGGTTCTGATAAGAGAAATTAA 1239 0.414 MGTGSKIDGPSTPSIRRDPYEVLSVSKDANDQEIKTAYRKLALKYHPDKNANNPEASELFKEVSYSYNILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAEEGIVVRVTSTAQSKFKLLYFEHDANGGYGLALQVDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEAAFFKRLEGLQPCEVSELKPGTHXFAVYGDNFFKTAAYTIVEALCAKSYEDTSQKLKDIEAQILRKRNDLRQFESEYRKALARYQEVTXRYAQEKQSVDELLKLRDTIHSSFTVAKSVSVSGNSSNLSNGSSSKIAGEDSKVESPVEDGSSDGKDKSGKKKWFNLNLKGSDKRN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1136 414 Coils Coil 289 328 - -
Prci5g1136 414 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 14 413 - -
Prci5g1136 414 CDD DnaJ 18 72 IPR001623 -
Prci5g1136 414 MobiDBLite consensus disorder prediction 363 414 - -
Prci5g1136 414 SUPERFAMILY Chaperone J-domain 17 88 IPR036869 -
Prci5g1136 414 MobiDBLite consensus disorder prediction 380 414 - -
Prci5g1136 414 FunFam Chaperone protein dnaJ 16 3 100 - -
Prci5g1136 414 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Prci5g1136 414 Coils Coil 330 330 - -
Prci5g1136 414 SMART dnaj_3 17 75 IPR001623 -
Prci5g1136 414 Gene3D DnaJ domain 8 100 IPR036869 -
Prci5g1136 414 MobiDBLite consensus disorder prediction 363 378 - -
Prci5g1136 414 PRINTS DnaJ domain signature 38 53 IPR001623 -
Prci5g1136 414 PRINTS DnaJ domain signature 55 75 IPR001623 -
Prci5g1136 414 PRINTS DnaJ domain signature 20 38 IPR001623 -
Prci5g1136 414 PRINTS DnaJ domain signature 75 94 IPR001623 -
Prci5g1136 414 MobiDBLite consensus disorder prediction 1 23 - -
Prci5g1136 414 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Prci5g1136 414 Pfam DnaJ domain 18 80 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1136 Prci-Chr5 29996763 30003668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1136 11 90 C2H2 Transcription Factor Family AT1G74250 42.353 2.29e-12 67.0