Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1129 ATGCAAATACAAAACATTCCACCTTCTGTTCCTGTTCTCTGCAAATCTTTTTGGCAGAATTTCTTTTCCAAAAAACAAGGCCTCGTCTCTCTCACTCCCTTGCTCCTCTCGCTCCTTCTTCCCCCTCCATTGTTCTGCTTCTGTAACTGCAGCAATGGCGGTATTCTCGCACCTCCTTCTACGTGTTTCCTTCTTCTTTTCTTCTTCTTTGCTTCTTATTCGCTTCTCCCTTCTGAAGCGTCCGTAAACCAAGATTTAGAAGCCCTCTTGGCGTTCAAAGCCGCTTCTGATACGCACAACAAGCTCACATCTTGGAACTCCACCACCCATCCCTGTACCTGGGCCTTTGTCTCGTGCCTTAAGAATCGAGTTTCGCGACTCGTTCTTGAAAACCTTGACCTCCATGGCTCCATCGAGCCGTTAACTTCTCTGACTCAGCTTCGAGTTCTGAGCCTGAAGCGAAACCGCTTATCCGGTCCCATTCCGAGTCTGTCTAATTTCACAGCCCTGAAGCTTTTGTTTCTTTCTCACAATGAGTTCTCCGGTGTGTTTCCGGTGACGGTTACTTCGCTTCTCCGCTTGTATCGCCTTGATCTGTCTCACAACAACTTGACCGGGAACATTCCGACGACGGTCAACAATCTGACTCACCTTCTCTCCCTCCGTCTCAATGACAACCAGTTCTCCGGTCACATTCCCACTCTGAACCTCTCCAATCTGCAGGACTTCAATGTCTCTGGTAACCGCTTCTCCGGCGAAATACCCAAACCAGTCTCGGGTTTCCCTGAATCATCGTTTGCTCAAAACCCATCCTTGTGCGGAGCTCCATTGGTCAAATGCAAGGACAGTTATGCCGTACCGATTAAACCCGGATCTGTGGGAGCCAACAATGCATCGCCATTAATGCCCCGAAGCAATCCCTCAACTTCAACGCCAGCGAACAATGCAGCCCCCGGAACATCACCCAACAACAGTCACCATCATAACGGAGCTTCGAAGATGAGTCCGATACTTCTAATTGCCATTATAGTCGGCGACATTTTGGTTCTGGCGGTGGTGTCCCTTCTTCTGTACTGCTGTTTCTGGCAAAACTATTCCACCAAATTGAAAGAGAAAAACATGTCGAAACTTCTAGAAAGCGAGAAGATCTTGTACTCATCAAGCCCATACCCATCATCCCAGCCCGGATTCGAAAGAGGTCAAATGGTGTTCTTCGAAGGGATGAAGAAGTTTGAACTTGAAGACTTGCTTCGAGCTTCAGCAGAAATGTTGGGGAAAGGTGGGTTTGGGACAGCCTATAAAGCTGTTCTCGATGACGGCAATGTCGTCGCCGTGAAGAGGCTCAAGGACGCTCAGATTAATGGGAAGAAAGAGTTCGAACAGCACATGGAAGTCCTGGGAAGGTTAAGACATCCAAATATTGTAAGCTTGAGAGCTTACTATTACGCTCGAGACGAGAGATTACTGGTCTATGATTACATGACCAATGGTAGCTTGTTTTGGCTCCTTCATGGAAACCGAGGACCCGGAAGAACCCCACTGGATTGGACTACGAGGCTCAAGATGGCTGCCGGAGTGGGTCGAGGCCTGGCGTTTATTCACGGCTCGTGCAAGGCCCTTAAGCTCACCCACGGTAACATCAAATCCACTAACATCCTCATTGACCAGGATGGGAACGCACGCGTGGCAGACTTCGGGCTCTCCGTATTCGCAACCCCTGCCACGTCAGCGTCAGCTGCAAAATCCAACGGCTATCGTGCTCCGGAAGCACTGGACGGTCGGAAAAACACGCAGAAGTCCGACGTGTACTCCTTCGGCGTTCTGCTGCTGGAGCTTCTCACAGGGAAGTGGCCCTCTGTTGGGGATGCGGGTGGGCCCGGAGGAGGTGGGGCCGTGGACCTGCCCAGGTGGGTCCAGTCAGTGGTGAGAGAAGAATGGACTGCTGAGGTGTTCGATATAGAGCTGATGAGGTACAAGGATATTGAGGAGGAGATGGTTGGCCTGCTTCAGATCGCAATGTCTTGCTGTGCAGCCGCACCGGATCAACGGCCCAGGATGAGCCACGTAGTGAGGATGATTGAGGACATCCGTGGGGTCGAGATGTCGCCGGGTCACCATGACGCGTCTGACTCAGTGTCCGAGTCACCATCCTTGTCGGAAGACGCCGGCGGAGCGAGTCAGTAA 2184 0.5124 MQIQNIPPSVPVLCKSFWQNFFSKKQGLVSLTPLLLSLLLPPPLFCFCNCSNGGILAPPSTCFLLLFFFFASYSLLPSEASVNQDLEALLAFKAASDTHNKLTSWNSTTHPCTWAFVSCLKNRVSRLVLENLDLHGSIEPLTSLTQLRVLSLKRNRLSGPIPSLSNFTALKLLFLSHNEFSGVFPVTVTSLLRLYRLDLSHNNLTGNIPTTVNNLTHLLSLRLNDNQFSGHIPTLNLSNLQDFNVSGNRFSGEIPKPVSGFPESSFAQNPSLCGAPLVKCKDSYAVPIKPGSVGANNASPLMPRSNPSTSTPANNAAPGTSPNNSHHHNGASKMSPILLIAIIVGDILVLAVVSLLLYCCFWQNYSTKLKEKNMSKLLESEKILYSSSPYPSSQPGFERGQMVFFEGMKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQINGKKEFEQHMEVLGRLRHPNIVSLRAYYYARDERLLVYDYMTNGSLFWLLHGNRGPGRTPLDWTTRLKMAAGVGRGLAFIHGSCKALKLTHGNIKSTNILIDQDGNARVADFGLSVFATPATSASAAKSNGYRAPEALDGRKNTQKSDVYSFGVLLLELLTGKWPSVGDAGGPGGGGAVDLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMSCCAAAPDQRPRMSHVVRMIEDIRGVEMSPGHHDASDSVSESPSLSEDAGGASQ 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1129 727 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 494 704 - -
Prci5g1129 727 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 64 698 IPR046959 -
Prci5g1129 727 Gene3D Transferase(Phosphotransferase) domain 1 494 712 - -
Prci5g1129 727 Gene3D Ribonuclease Inhibitor 79 141 IPR032675 -
Prci5g1129 727 Gene3D Ribonuclease Inhibitor 142 285 IPR032675 -
Prci5g1129 727 Pfam Protein kinase domain 421 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1129 727 SUPERFAMILY L domain-like 85 277 - -
Prci5g1129 727 ProSiteProfiles Protein kinase domain profile. 418 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1129 727 MobiDBLite consensus disorder prediction 708 727 - -
Prci5g1129 727 FunFam pollen receptor-like kinase 1 391 493 - -
Prci5g1129 727 MobiDBLite consensus disorder prediction 298 329 - -
Prci5g1129 727 CDD STKc_IRAK 424 696 - -
Prci5g1129 727 Gene3D Phosphorylase Kinase; domain 1 396 493 - -
Prci5g1129 727 MobiDBLite consensus disorder prediction 295 329 - -
Prci5g1129 727 MobiDBLite consensus disorder prediction 701 727 - -
Prci5g1129 727 ProSitePatterns Protein kinases ATP-binding region signature. 424 446 IPR017441 GO:0005524
Prci5g1129 727 SUPERFAMILY Protein kinase-like (PK-like) 422 693 IPR011009 -
Prci5g1129 727 Pfam Leucine rich repeat N-terminal domain 83 119 IPR013210 -
Prci5g1129 727 FunFam Nuclear pore complex protein NUP107 82 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1129 Prci-Chr5 29969134 29972529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1129 85 726 Receptor kinase-like Gene Family AT1G68400 66.514 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci5g1129 Pkinase 5.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1129 - - qsa:O6P43_032719 946.806