Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1128 ATGTTCATCAGAATGGTTTCAGTTAAAGTGTTTTGCTTTCTCTTACCTTCATTCATCTTGCAGCTCTTCTTGGTTGGAGCTGAAAAATGCCCACTTTCAGTTAACTGTGGAAATCTAGGAGAGGAAATTCATTTCCCTTTCACGAGCTCAGATCACCCAGATTGTGGCTTATTGATCATTCTTGGCTGTGGTGATAATGACCCAAATACCAAAAAAACCATCAAGTACAATGAAAAATGGTTTGATGTTGTCGAACTCAACCAGACTTCCTTTACCATCAGAGACGATGATCTCCACGACTTTTTACTGTCACATAGCTGTAATGTCTTCAACCATTCTCTCCCTTTTAGTTCAAATTCTAGTTTTGCTTCTTATTCTTTGAAATATAAAGTAAACTTGTTCAATTGCAAAAACAACACCGTCAATCTGGATCCCCCGGAATCATACTCTATGTTCAATTCCTGCTCTGAAGAAATTATCTTTTATAAAAATTCATCTTCTGATGATGATGAGGGCCGGAGCTTTTTCAAATCTTGTAAAACTCTTCAGCTTCCAATCTCAAACACCACTGCGATTGTGAAACCTGATTTCCAGGACAAGAGCCCTTTTGATTTCTTATCTGGTGAGATTACCATCGATATAGATTTATCCCCAGATTGTTCTAGTTGTTACTACATTGAAGGAGGACAATGTCGACAGGACCTCAAGGGAAGGTTTTATTGTGCCAAAGAGAAAACCAGAAAGGACAGGCGTGTAGTTATAGCAGTTTCAGTTTCTGGAGCACTAGGAATACTTTTGGTTTTGGGTTTCTTCTTGAGAAGACGCTTTTACAACAAACCAAACCCTACCCACTTATTGATTGAGAAGTTTCTTGAAGAACATGGACACCTTACAGCCAAAAGGTACAATTATATGGAGGTCAAGAAGGCCACAAACTCCTTCAGAAACAAGTTGGGTCAAGGAGGATTTGGCAGTGTCTACAAAGGGAAGCTAAGCGATGGAACTCTTGTGGCTGTGAAGGTATTAACTGAGCTAAACGGTGATGGCGAAGAATTCATCAATGAAGTTTCCAGCATAAGCGTGACTTCTCATGTCAACATCGTTAGCTTACTGGGCTTTTGTTTGGAGGGTTCTAAAAGAGCTCTGATATATGAGTACATGTCTAATGGATCTATTGACAAGTACATTCATGAACAGAAAGATCCATCAAAGCTCAATCTCCAGCTGACTTGCAAAGCTATGTACAATATTGCCGTTGGCGTTGCTCGTGGATTAGAGTATCTGCACAGAGGTTGCAACACTAGAATCTTGCATTTGGACATCAAGCCTCACAATATATTGCTTGATGACGATTTCTGTCCTAAGATATCAGACTTTGGACTCGCAAAAATCTGCCCGAAGAAAGACAGTATTGTATCGTTGTTAGGAGCAAGAGGAACGGCAGGATACATAGCGCCTGAAGTGTTTTCTAGAAACTTTGGGGGGGTGTCTCATAAATCCGATGTTTACAGCTATGGAATGATGATGTTAGAAATAGTGGGAGGAAGGAAGAATATGAACATGGAAGTTGAAGGTTCAAGTGAAATATTCATGCCCCACTGGATGCACCAGCGTCTGAAAGCAAACCAGGAGTTGAGATTGCAGTGCATCAAGAATGAGAAGGATAGAGAAGTGATGAAGAAGATAGTGATAGTGAGCTTATGGTGCATACAAATTGATCCTTTGAATCGGCCAGCGATGAACAAGGTGGTGGATATGATGGAAGGAGACTTGGAATCATTGGAATTACCACAGTTGCCTGTTCTTTCTTTGCCTCCAACAACTCTCTCAAGGAGTGTCGTAAATGATATTATCTCCAGCAGCTTCCATTCTATCTCACTTAGTTCTTAA 1890 0.4037 MFIRMVSVKVFCFLLPSFILQLFLVGAEKCPLSVNCGNLGEEIHFPFTSSDHPDCGLLIILGCGDNDPNTKKTIKYNEKWFDVVELNQTSFTIRDDDLHDFLLSHSCNVFNHSLPFSSNSSFASYSLKYKVNLFNCKNNTVNLDPPESYSMFNSCSEEIIFYKNSSSDDDEGRSFFKSCKTLQLPISNTTAIVKPDFQDKSPFDFLSGEITIDIDLSPDCSSCYYIEGGQCRQDLKGRFYCAKEKTRKDRRVVIAVSVSGALGILLVLGFFLRRRFYNKPNPTHLLIEKFLEEHGHLTAKRYNYMEVKKATNSFRNKLGQGGFGSVYKGKLSDGTLVAVKVLTELNGDGEEFINEVSSISVTSHVNIVSLLGFCLEGSKRALIYEYMSNGSIDKYIHEQKDPSKLNLQLTCKAMYNIAVGVARGLEYLHRGCNTRILHLDIKPHNILLDDDFCPKISDFGLAKICPKKDSIVSLLGARGTAGYIAPEVFSRNFGGVSHKSDVYSYGMMMLEIVGGRKNMNMEVEGSSEIFMPHWMHQRLKANQELRLQCIKNEKDREVMKKIVIVSLWCIQIDPLNRPAMNKVVDMMEGDLESLELPQLPVLSLPPTTLSRSVVNDIISSSFHSISLSS 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1128 629 ProSiteProfiles Protein kinase domain profile. 312 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1128 629 Gene3D Transferase(Phosphotransferase) domain 1 387 595 - -
Prci5g1128 629 FunFam PR5-like receptor kinase 387 598 - -
Prci5g1128 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Prci5g1128 629 Pfam Protein tyrosine and serine/threonine kinase 314 586 IPR001245 GO:0004672|GO:0006468
Prci5g1128 629 SUPERFAMILY Protein kinase-like (PK-like) 297 587 IPR011009 -
Prci5g1128 629 Gene3D Phosphorylase Kinase; domain 1 288 386 - -
Prci5g1128 629 FunFam serine/threonine-protein kinase PBS1-like 287 386 - -
Prci5g1128 629 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Prci5g1128 629 PANTHER RUST RESISTANCE KINASE LR10-RELATED 286 600 IPR045874 GO:0004672
Prci5g1128 629 SMART serkin_6 312 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1128 Prci-Chr5 29965079 29967624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1128 13 602 Receptor kinase-like Gene Family AT5G38260 39.482 2.32e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci5g1128 PK_Tyr_Ser-Thr 9.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1128 - - vun:114191483 686.411