Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1126 ATGGCCTCTGTTGAGGAGAGGCGGCGTCATCATGATCTTGTGCCTCTCGCTGCATTGTTAAGCCGAGAGATGAAGAGTGAGAAGATGGAGAAGCCCACTGTGAGTTATGGGCATGCTGCTCAGTCTAGAAAAGGGGAGGATTACTATCTAATCAAGACTGATTGTCAGCGAGTGCCTGGGAATCCTTCAACAGCATTTTCTGTATTTGCGATCTTTGATGGACACAACGGAAATGCTGCGGCCATTTTCAGTAGGGAGCAATTGTTAAATCATGTGTTGAGTGCTGTTCCTCGAGGTCTTGGACGGGAAGAGTGGCTTCAGGCCTTACCTCGGGCCTTAGTGGCTGGGTTTGTGAAGACTGACAAGGAATTCCAGAGCAGAGGAGAAACTTCTGGAACTACAGCCACGTTTGTGATAGTGGATAGATGGACTGTGACTGTTGCATCTGTTGGTGATTCCCGTTGTATATTAGACACCCAAGGTGGAGCTGTTACAAACTTAACTGTTGATCACCGACTTGAAGAGAATATCGAAGAGAGGGAACGTGTTACAGCTAGTGGAGGTGAAGTTGGGAGGCTGAGCATTGTTGGTGGTGCAGAGATTGGTCCCCTTCGTTGTTGGCCAGGCGGTTTGTGCCTTTCTAGGTCAATTGGAGACATGGATGTTGGGGAGTTTATAGTTCCTATACCATATGTCAAACAAGTGAAGCTATCAAATGCTGGCGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGATGCTTTATCCTCAGACATGGCTGCAAAATCTTGCAGGGGTTTGCCAGCTGAACTTGCTGCTAGGCAGGTTGTCAAGGAAGCATTGAGAACAAGAGGGTTAAAGGATGACACAACTTGCATAGTCGTTGACATAATTCCTCCTGAAACTGCAATGCCACCGCCGCCTCCCCCAAAAAAGAAGAACAAGTTAAGGGCTCTGCTTTTCAGGAAGAAGTCTCGTGATGCTGCTGGAAAGCTATCAAAGAAGCTCTCAGCTGTAAATATAGTGGAGGAACTGTTTGAAGAAGGATCAGCCATGCTTGCTGAAAGATTAGGTAATGATGAGAATACAGGGAAATCAACATCAGGTCTCTTTATCTGCGCTGTGTGCCAAGTGGATCTTGCCCCAAGTGAGGGCATCTCTGTTCATGCCGGTTCAATCTTCTCGACCAGCTCGAAGCCCTGGCAAGGTCCTTTTCTATGCGCTGGTTGTCGCGATAAGAAGGATGCCATGGAAGGGAAGCGTCCTAGTGGAATCAAAGTCTCATAG 1287 0.4763 MASVEERRRHHDLVPLAALLSREMKSEKMEKPTVSYGHAAQSRKGEDYYLIKTDCQRVPGNPSTAFSVFAIFDGHNGNAAAIFSREQLLNHVLSAVPRGLGREEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPETAMPPPPPPKKKNKLRALLFRKKSRDAAGKLSKKLSAVNIVEELFEEGSAMLAERLGNDENTGKSTSGLFICAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCAGCRDKKDAMEGKRPSGIKVS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1126 428 SMART PP2C_4 27 295 IPR001932 -
Prci5g1126 428 PANTHER PROTEIN PHOSPHATASE 35 296 IPR015655 GO:0004722|GO:0006470
Prci5g1126 428 SUPERFAMILY PP2C-like 36 297 IPR036457 -
Prci5g1126 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Prci5g1126 428 SMART PP2C_SIG_2 30 297 IPR001932 -
Prci5g1126 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Prci5g1126 428 Gene3D - 31 302 IPR036457 -
Prci5g1126 428 Pfam Protein phosphatase 2C 62 282 IPR001932 -
Prci5g1126 428 CDD PP2Cc 34 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1126 Prci-Chr5 29952589 29956728 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1126 1 427 PP2C-type Phosphatase Gene Family AT1G68410 79.817 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1126 - - tcc:18609180 764.222