Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1125 ATGAGTAGCAATGGCCAATCTTCCCGTAACAATCAAAACATCAGAGACTTAATCTGCAACGCTGGTGCTGGCGCCTCAGCTGGGGCAATAGCGGCTACATTTGTGTGCCCATTGGATGTCATCAAGACTAGGCTACAAGTTCATGGTCTTCCCCCTGAGCAGAAGGGTAGTGTTATTATCACAAGTTTGCGGAATATAGCAAGGACTGAAGGTTTCAGGGGACTGTACCGTGGCCTTTCACCAACAATATTAGCATTACTTCCAAACTGGGCGGTTTACTTCACAGTTTATGAGCAACTAAAAGGCTTGCTTCGTTCACATGATGGTTGCCACCAACTCACAACTGGTGAAAATATGATAGCTGCTGCTGGTGCTGGAGCCGCCACAGCATTTTCAACAAACCCATTGTGGGTTGTTAAGACCAGACTCCAAACGCAGGGAATGAGGCCAGATGTTGTTCCTTACAAAAGTGTTTTTTCTGCTCTGACAAGGATTACCCGTGAGGAAGGCATACGAGGACTGTACAGCGGCATCTTGCCGTCACTGGCAGGCATAAGTCATGTTGCAATACAATTCCCATCATATGAAAAGATCAAGTCATACATGGCGAAGAAGGAGAACACTACAGTCGACAAGCTAAGTCCGGGAAATGTTGCCATTGCATCTTCAATTTCCAAAGTAACTGCCTCTGTAATGACTTATCCTCATGAGGTGATACGATCCAGGCTACAGGAGCAAGGACATGCCAAAAATACCAAGTTCCGTTATGCAGGGGTTGTTGATTGTACTAAGAAGGTGTTCTACAAGGAAGGCTTTCCCGGCTTTTATCGCGGTTGTGCTACCAATCTATTAAGGACAACTCCATCGGCTGTCATTACATTCACCAGTTATGAGATGATATACAGGTTCTTCCATCGTTTTGTGCCTCAGGACAATGTGTATCCACAAGGCTATCCTAAATCTAATGATCTTAACAAGCCCAAGCCAGAAGACGGTGATATGAAGTTTAAAAAAGGCCCTATGGTATGA 1029 0.4509 MSSNGQSSRNNQNIRDLICNAGAGASAGAIAATFVCPLDVIKTRLQVHGLPPEQKGSVIITSLRNIARTEGFRGLYRGLSPTILALLPNWAVYFTVYEQLKGLLRSHDGCHQLTTGENMIAAAGAGAATAFSTNPLWVVKTRLQTQGMRPDVVPYKSVFSALTRITREEGIRGLYSGILPSLAGISHVAIQFPSYEKIKSYMAKKENTTVDKLSPGNVAIASSISKVTASVMTYPHEVIRSRLQEQGHAKNTKFRYAGVVDCTKKVFYKEGFPGFYRGCATNLLRTTPSAVITFTSYEMIYRFFHRFVPQDNVYPQGYPKSNDLNKPKPEDGDMKFKKGPMV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1125 342 Gene3D Mitochondrial carrier domain 110 307 IPR023395 -
Prci5g1125 342 Pfam Mitochondrial carrier protein 213 305 IPR018108 -
Prci5g1125 342 Pfam Mitochondrial carrier protein 113 205 IPR018108 -
Prci5g1125 342 Pfam Mitochondrial carrier protein 20 106 IPR018108 -
Prci5g1125 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Prci5g1125 342 MobiDBLite consensus disorder prediction 318 342 - -
Prci5g1125 342 Gene3D Mitochondrial carrier domain 2 109 IPR023395 -
Prci5g1125 342 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Prci5g1125 342 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Prci5g1125 342 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Prci5g1125 342 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Prci5g1125 342 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Prci5g1125 342 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 16 309 IPR044712 GO:0006862|GO:0055085
Prci5g1125 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Prci5g1125 342 SUPERFAMILY Mitochondrial carrier 15 299 IPR023395 -
Prci5g1125 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Prci5g1125 342 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1125 Prci-Chr5 29919356 29925237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1125 1 311 Chloroplast and Mitochondria Gene Families AT1G25380 70.476 6.94e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1125 K15115 - gmx:100816376 527.709