Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1119 ATGGAACTTTTTGTGGCTGCCGATTCTCTGCTTCGCTTCCTTTGTCTGTGTTGTTTTCTGCTTCCTCTCTCAGTTGCGTGTCCAGAGTTTTTTGAGTGCGGAGATAAAGGGAAACTTTACTTTCCCTTCACCACCACAAACAACTCAGAATGTGGCTTACTACCTGTAATGGGTTGCGATGATCCAGAGAAAGGGATAAAAGTCAAGCTGGGAAGCCGAACATTCTGGGATGACAAATTTGGACACACAGGAGAGTTCCAAATTGAAAGAATCTTGCAGAAGGACTTGGATTATGAAATCATCGTTCGTGGCAGTGAGTTTAAAAAGCTCTTGGATCACGATCATTGCGAGTTCATGTACATCGAAGACGAAGCCCCTAATCCTGGGGAGTCACCTCCGTTGTTTTTCTCTTTCTTAAATGCCGTTTACCTGCTCAGATGCGAACACCTTCGCGACAACAACACCTACAAGGTGTTCAATTACGACTCCCCATATCACTGTAATCTCAACAACCTCTACTATCCTCCCGACGAAGGTATCCAGTGGCCTGACCAACCTTGGAGTGAATGTTCTCTGGTGCATCTTCCATTTGAACAGAGACCTTCAGACCACCAACGTCCTTGTCTACCAACCCCGGCAACCATATCTGAAGAAATCCATATACAAGTACATCTATCCAAGTCTTGTATTGATTGTCTTTATTACAGAAAAGGGCAGTGCCTGCGTGATGGAAAATGTACAAAGGATGGGGTCAAGAAAATCGATTCCAGGTCTATAGTTATAGGTGTAGCTATTGGAAGTGTTGGCGTGATTATAATTGGCTTGGTTGTTATTCTACTGCGGAACAAACGAAGATACAAGTCTTTAGGCTCACAAAATCAGTCAAGAAGCATTGAATCTGATACTACTCACTCAAATGCAATCCTAGAGAGCAGAAATATCTACTTTGAGGTCCCTGTCTTCTCCTATGATGAGCTTGAAGAAGCAACAAACAAATTTCATCAATCAAGAGAACTTGGAAGTGGAGGCTTTGGAACTGTTTACCATGGAAAGCTTAAAGATGGACGAGAAGTTGCTATCAAACGTCTATTTGAGCGCAACTGTAAACGTGTGGAGCAATTCATGAATGAAGTTAGGATCCTCACACGCTTGCGCCATAGAAACCTTGTATCACTCTATGGCTGCACTTCACGGGCCAGTCGTGAACTGCTTTTGGTCTATGAATACATTTCAAATGGAACTCTTAGTTGTCATCTCCATGGCAATCTTGCAAAGCCTGGTTCACTGCCATGGCCTGTGAGGATGAGGATTGCCATAGAGATAGCAAATGCATTGTCCTATCTCCATGCTTGTGACATCATTCACCGGGATGTCAAATCCAGCAACCTTCTACTTGATGACCATTTTTGTGTCAAGGTTGCTGACTTTGGTCTTTCAAGGTTGTTCCCCAAGTTTGTCTCTCATGTCTCCACAGCTCCAGCAGGAAGCCCAGGCTATTTGGATCCAGAATATCACCAGTTCTACCAGCTTACTGAAAAGAGCGATGTTTATAGTTTTGGGGTCGTGCTCATTGAGCTGATATCTTCTAAGGCAGCTATCGATGTCACAAGGGACAAGGATGAGATTAAATTGGCAAATCTGGCAATTAAGAAGATTCAAAGGAGAGCATTTACTGAGTTGGTAGATCCTTCCCTTGGTTTTGAGTCAGATAATGAGGTTAAGTGGATGATAATCTCAGTGGCAAAGTTAGCTTTCCAGTGCTTACAAAGGGACAGGGAGATGAGACCTTCCATGGATGAAGTAATGGAGTTGCTGCAGAAAATTGAAAATGGGAAGGATGATCTTGAGGATCTCGAGTTTCATGGTGCTGGCTTTTCAAGCAGGGAGATTCATACATCTCTGCCAACCTCAGTAGATAAGGATGGAGCAGGATCATTTAAGAACTTGATGCCACAACACCCTCCTCGTACAGTATGA 1977 0.435 MELFVAADSLLRFLCLCCFLLPLSVACPEFFECGDKGKLYFPFTTTNNSECGLLPVMGCDDPEKGIKVKLGSRTFWDDKFGHTGEFQIERILQKDLDYEIIVRGSEFKKLLDHDHCEFMYIEDEAPNPGESPPLFFSFLNAVYLLRCEHLRDNNTYKVFNYDSPYHCNLNNLYYPPDEGIQWPDQPWSECSLVHLPFEQRPSDHQRPCLPTPATISEEIHIQVHLSKSCIDCLYYRKGQCLRDGKCTKDGVKKIDSRSIVIGVAIGSVGVIIIGLVVILLRNKRRYKSLGSQNQSRSIESDTTHSNAILESRNIYFEVPVFSYDELEEATNKFHQSRELGSGGFGTVYHGKLKDGREVAIKRLFERNCKRVEQFMNEVRILTRLRHRNLVSLYGCTSRASRELLLVYEYISNGTLSCHLHGNLAKPGSLPWPVRMRIAIEIANALSYLHACDIIHRDVKSSNLLLDDHFCVKVADFGLSRLFPKFVSHVSTAPAGSPGYLDPEYHQFYQLTEKSDVYSFGVVLIELISSKAAIDVTRDKDEIKLANLAIKKIQRRAFTELVDPSLGFESDNEVKWMIISVAKLAFQCLQRDREMRPSMDEVMELLQKIENGKDDLEDLEFHGAGFSSREIHTSLPTSVDKDGAGSFKNLMPQHPPRTV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1119 658 Pfam Protein tyrosine and serine/threonine kinase 334 605 IPR001245 GO:0004672|GO:0006468
Prci5g1119 658 MobiDBLite consensus disorder prediction 631 658 - -
Prci5g1119 658 ProSiteProfiles Protein kinase domain profile. 333 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1119 658 Gene3D Transferase(Phosphotransferase) domain 1 410 618 - -
Prci5g1119 658 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 638 IPR044652 GO:0004672
Prci5g1119 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Prci5g1119 658 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Prci5g1119 658 CDD STKc_IRAK 339 608 - -
Prci5g1119 658 FunFam Wall-associated receptor kinase-like 20 410 617 - -
Prci5g1119 658 Coils Coil 598 618 - -
Prci5g1119 658 SMART serkin_6 333 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1119 658 FunFam receptor-like serine/threonine-protein kinase NCRK 309 409 - -
Prci5g1119 658 SUPERFAMILY Protein kinase-like (PK-like) 314 608 IPR011009 -
Prci5g1119 658 Gene3D Phosphorylase Kinase; domain 1 305 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1119 Prci-Chr5 29891119 29894259 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1119 215 610 Receptor kinase-like Gene Family AT1G25390 51.870 1.10e-135 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci5g1119 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1119 - - pcin:129310591 1309.28