Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1117 ATGGTTCTACCTCTTCATGGGTTCCTCTTCCTCTTCCTCTTTTTGTTTTGTGACCATGTGCTTCCTCTCTCTCCTGCTTCTGAAGAGTGTCCACGTTTCTTTTACTGTGGAAATCTGGGCAAGGTTTGGTTCCCTTTCACCACTGCAGAACACAAAGACTGTGGAATGTTGGCGTTTCATGGTTGTGAAGACCCTAACGCTACAAAAACTGTGTACTTCTTCAGTGGAAAACAGAAGTTTCAAGTGATGTCTATAAACAACTTTTCTAAAAAGGTTTTAGTCCGAGACACAGATTTACAGAAGCGTTTGGAAAATAATAGCTGCGATGCCTTCTGCTGCAATATCACTCTTCCTCCACGCTCACCCTTGGGTCATTTTCAGATCCTCAAACCTATAACCCTTTACAAATGCAAGCTTAAAGTTAGTCCTCCAAAGCAATTTCTGAACTATAAAGGATGTGCCAAGGGTAGGAATGAGACGATCTATTTCAGAACTCAAGATCAAGATGATCCTTCACCTTCTTTAGCAGCATGTCCAAGGGTTAAGCTCTCAGCAAGCCGTGCTATTTTGCTATCTGGGGATCCATTTAAATTCATAACTCCTGAATTCTTCCTTCGTATTGAACTTTCTAATGACTGTCAACGGTGTCGTGATGGAGGAGGCTTATGCCGAGTCAAGAGCACAGGGGAATTTTACTGTTCCAGATCCAAAGATAAAAGGCGGGCTTTGAAGCTGAAATTGCTGATTGGTTTTGGAGTGGGATTGGGGATCCTTGTACTAACGTTGGCGATCATCTTCCGAGGCTGCAAACAGAGACAGAAACATGTCCAACGCCGATCAACAAATCAATGTACGAATGAACCAGATCTAGAAAATGATAGACTCTTCTGCGGAGTTCCAATCTTCTCTTACAAGGAACTTCAAGATGCTACCAACTACTTCAACCCCTCCAACAAGCTTGGAGATGGAGGCTTCGGCTCTGTTTACTATGGGAAGCTTCAAGATGGGAGTGAAGTTGCAGTTAAGCATTTATTCCATCACAACTACAAGCGAGTGGAACAGTTCATGGTTGAAGTTGAGATCCTTGCTCGTTTGCAACACAAAAACCTTGTGTCCCTCTATGGCTGCACTTCTCGTCAAAGCTCTGAGCTCCTCCTTGTTTATGAATACATCGCAAATGGCACTCTTGCTAGTCACCTCCGTGGCCACTCTGCAAAACCTACTTTATTGACATGGCCTACACGTATCAAAATCGCAATAGAAACTGCAAGTGCTCTAGCTTACCTTCATGCTTCGGGCATCATCCACCGTGATGTCAAAACAAACAACATTCTCCTCAACAATAATTTTAGTGTTAAAGTTGCAGATTTCGGACTTTCTAGGTTTTTCCCTGATGACGTATCACATGTTTCTACAGCTCCTCAAGGAACACCAGGATATCTTGATCCAGAATACCACTTTTGCTTCAGGCTAACAAATAAAAGCGATGTCTATAGCTTTGGCGTTGTACTCATGGAATTGATATCTTCAATGCTGGCAGTGGATATGGGAAGGAACAAAGATGAGATTACGTTGGCAAATCTAGCAATGAGGAAGATCCAGAGAAATGAATTTGAGGAGCTAATAGACCCATGTTTGGGGATTGAAAAGGACAGGGAGGCAATGAAGAAGGTGATTGCAGTTGGAGAATTGGCATTTCAATGTTTGCAGATAAATAATGAGATGAGGCCTTCCATTGACGAGATTTTAGAGATTTTGAAGAAAATTGATGAGAGTGATAATGCAAGGGAAGACGATGATGGTGGTTGTGCTAGAATTTCAAAGAATAAAGCAGAAATATATGCATGA 1848 0.4215 MVLPLHGFLFLFLFLFCDHVLPLSPASEECPRFFYCGNLGKVWFPFTTAEHKDCGMLAFHGCEDPNATKTVYFFSGKQKFQVMSINNFSKKVLVRDTDLQKRLENNSCDAFCCNITLPPRSPLGHFQILKPITLYKCKLKVSPPKQFLNYKGCAKGRNETIYFRTQDQDDPSPSLAACPRVKLSASRAILLSGDPFKFITPEFFLRIELSNDCQRCRDGGGLCRVKSTGEFYCSRSKDKRRALKLKLLIGFGVGLGILVLTLAIIFRGCKQRQKHVQRRSTNQCTNEPDLENDRLFCGVPIFSYKELQDATNYFNPSNKLGDGGFGSVYYGKLQDGSEVAVKHLFHHNYKRVEQFMVEVEILARLQHKNLVSLYGCTSRQSSELLLVYEYIANGTLASHLRGHSAKPTLLTWPTRIKIAIETASALAYLHASGIIHRDVKTNNILLNNNFSVKVADFGLSRFFPDDVSHVSTAPQGTPGYLDPEYHFCFRLTNKSDVYSFGVVLMELISSMLAVDMGRNKDEITLANLAMRKIQRNEFEELIDPCLGIEKDREAMKKVIAVGELAFQCLQINNEMRPSIDEILEILKKIDESDNAREDDDGGCARISKNKAEIYA 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1117 615 Gene3D Transferase(Phosphotransferase) domain 1 391 601 - -
Prci5g1117 615 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Prci5g1117 615 Pfam Protein tyrosine and serine/threonine kinase 317 586 IPR001245 GO:0004672|GO:0006468
Prci5g1117 615 SUPERFAMILY Protein kinase-like (PK-like) 299 590 IPR011009 -
Prci5g1117 615 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 602 IPR044652 GO:0004672
Prci5g1117 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Prci5g1117 615 Gene3D Phosphorylase Kinase; domain 1 286 390 - -
Prci5g1117 615 SMART serkin_6 314 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1117 615 CDD STKc_IRAK 320 589 - -
Prci5g1117 615 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 294 390 - -
Prci5g1117 615 FunFam Wall-associated receptor kinase-like 20 391 599 - -
Prci5g1117 615 PRINTS Tyrosine kinase catalytic domain signature 388 401 IPR001245 GO:0004672|GO:0006468
Prci5g1117 615 PRINTS Tyrosine kinase catalytic domain signature 428 446 IPR001245 GO:0004672|GO:0006468
Prci5g1117 615 PRINTS Tyrosine kinase catalytic domain signature 495 517 IPR001245 GO:0004672|GO:0006468
Prci5g1117 615 ProSiteProfiles Protein kinase domain profile. 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1117 Prci-Chr5 29824475 29826951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1117 80 593 Receptor kinase-like Gene Family AT1G25390 47.692 6.15e-147 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci5g1117 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1117 - - gmx:100789176 570.081