Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1114 ATGATCCAAAACCAACTCTTCTCTTTTTTCTTCTTCGTCTTCGCCTTCACATCCAGATTCACCTTGTGTTCGTCTCTGAACTCAAACTTCGAAGCTTGTCAGCCAGCAACCTGCGGCAAACACCGAATAACCTACCCATTTTACATCGAAGGCCGACAAAAACCCTTCTGTGGGTACCCAGGTTTCGGGCTTTCTTGTTCCGGTAATGGCTTCCCAATCGTTAGTGTCTCCAATACCCAGTACATCATCCATGAAATTTCTTACCCCAACCAATCAATTCGAGTGTCCGAGGCTGCTATCTCTAACCGCAGTTCCTGTGCGATTCCTCGTAATCACAACCTCACCCTTGATGGAACCAGATTCAGTTTCGGTCCGAACCAGAGCGACCTGTTCTTGGTGTTCGGGTCATGCAACACGGGGTCGCTGCCGGATAATCTTTTGAAGTACAGAATTGGGTGTTCTGCAGAGAATGAAACGATGCCGGTTTTGGCCATGACGGAGGAGGGTGGAGATTTGAGGTCTGCGACGGAGAAGTGTAATGGTGTGGTGGTGAAGACGAAGATAGAAATTAATGGAACGAAGAAAGGAGAGATTAAGAATGGAGATTTGTTGAGAAGAGGGTTTGTATTGAATTGGACTGTGTCAAGCTGTAGTTTGTGTGAGAAGACGGGAGGGAAGTGTGGCTTCAACGCCGAGCCAGAGGTTTACAGCTTCAAATGCTATTGCCCGGATAGAGATCATGCTCTGAAATGTGATCCTGAGGATAAGAGCAGGGTTCTGAAGCTGGGACTCGGAATAGGATTAGGTATTGGGCTTCCAGCCATTCTGGCGACCGTGTGGCTCATCGGATGGTGGTGTTACCGGAGAAAACATGGTTTAGATGATGATCAGTACTTAGAACCCAGAATCTCTTATTCTGGTGTCTACTCAAATTCAGAGCTAGAAAATGGCAATATCTACTTAGGAGTCCCACTGTTCTCTTACAAGCAGCTTCAAGAAGCAACAAACAACTTTGACCAAGCAAGAGTACTTGGAGATGGTGGCTTTGGAATTGTTTACTATGGAAAACTTCGTGATGGACGAGAAGTTGCTGTCAAACGGCTATACGAACATAATTACAGACGAGTAGAACAGTTCAGGAATGAAGTGAAGATACTTGCACATCTACGCCACAAAAATCTTGTGTCTCTCTATGGCTGCACTTCGCGCCAAAGTCAAGACCTTCTTCTTGTCTACGAATATATCTCAAATGGCACTGTTTCTTGTCACCTTCATGGTGATTCCTCAAACCCCATGTCGTTGCCATGGAATATTCGCATCAAAATTGCCATAGAAACTGCAAGCGCCTTGGTTTACCTTCATGCTTCAGACATCATCCATCGTGATGTCAAGACCAACAACATCCTTCTTGACAACAATTTTAACGTCAAAGTTGCTGACTTTGGACTTTCTAGATTGTTTCCTAATGACGTGTCTCATGTTTCCACAGCTCCACAAGGAACGCCAGGTTATGTAGACCCAGAGTACTACCAATGTTACCAACTTACTAGTAAGAGTGATGTGTATAGCTTTGGAGTCGTTCTTATGGAGTTGATATCTTCTAAACCAGCAGTTGATATCAGTAGAAATAAAGATGAAGTGAACTTGTCGAGTTTGGCAGTGAAGAAGATTCAAGAGAGTGCATTTGTTGAGCTGGTAGATCCATGCTTGGGGATTGAGAAGGATAGTGAGGTGAAGAGGATGGTAGTTTCTGTGGGAGAATTGGCATTTCAGTGTTTACAGAGAGATAAGGATTTGAGGCCTTCCATGGAAGAGGTTTTAGAAGCTCTCAAGAGGATTCAGAGTGGAAAAGGTAATGAGGTTGAGAATCTTGAAGATGGTGGGATTTTTGATAGTGAAAGTGTGAGTCCATCAGGGCCACCACCACCGCCATCGCCGCCTTCAATGTCGCCGGAGAAGGAAGAGGTTGGCTTGTTGAAGAAGGTGAACCTGCTTCCTCCTTCGCCCAATACTGTGACTGATAAATGGAGAAGTGAATCTTCAACCCCTAATATCAGTTGTTGA 2064 0.4486 MIQNQLFSFFFFVFAFTSRFTLCSSLNSNFEACQPATCGKHRITYPFYIEGRQKPFCGYPGFGLSCSGNGFPIVSVSNTQYIIHEISYPNQSIRVSEAAISNRSSCAIPRNHNLTLDGTRFSFGPNQSDLFLVFGSCNTGSLPDNLLKYRIGCSAENETMPVLAMTEEGGDLRSATEKCNGVVVKTKIEINGTKKGEIKNGDLLRRGFVLNWTVSSCSLCEKTGGKCGFNAEPEVYSFKCYCPDRDHALKCDPEDKSRVLKLGLGIGLGIGLPAILATVWLIGWWCYRRKHGLDDDQYLEPRISYSGVYSNSELENGNIYLGVPLFSYKQLQEATNNFDQARVLGDGGFGIVYYGKLRDGREVAVKRLYEHNYRRVEQFRNEVKILAHLRHKNLVSLYGCTSRQSQDLLLVYEYISNGTVSCHLHGDSSNPMSLPWNIRIKIAIETASALVYLHASDIIHRDVKTNNILLDNNFNVKVADFGLSRLFPNDVSHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLMELISSKPAVDISRNKDEVNLSSLAVKKIQESAFVELVDPCLGIEKDSEVKRMVVSVGELAFQCLQRDKDLRPSMEEVLEALKRIQSGKGNEVENLEDGGIFDSESVSPSGPPPPPSPPSMSPEKEEVGLLKKVNLLPPSPNTVTDKWRSESSTPNISC 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1114 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Prci5g1114 687 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
Prci5g1114 687 CDD STKc_IRAK 344 613 - -
Prci5g1114 687 MobiDBLite consensus disorder prediction 636 650 - -
Prci5g1114 687 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 680 IPR044652 GO:0004672
Prci5g1114 687 SUPERFAMILY Protein kinase-like (PK-like) 318 610 IPR011009 -
Prci5g1114 687 Gene3D Phosphorylase Kinase; domain 1 311 414 - -
Prci5g1114 687 FunFam Wall-associated receptor kinase-like 20 415 623 - -
Prci5g1114 687 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Prci5g1114 687 Pfam Wall-associated receptor kinase C-terminal 169 244 IPR032872 -
Prci5g1114 687 ProSiteProfiles Protein kinase domain profile. 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1114 687 Gene3D Transferase(Phosphotransferase) domain 1 415 624 - -
Prci5g1114 687 SMART serkin_6 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1114 687 FunFam receptor-like protein kinase FERONIA 304 414 - -
Prci5g1114 687 Pfam Protein kinase domain 339 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1114 687 MobiDBLite consensus disorder prediction 666 687 - -
Prci5g1114 687 MobiDBLite consensus disorder prediction 617 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1114 Prci-Chr5 29731547 29738696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1114 32 686 Receptor kinase-like Gene Family AT1G25390 45.740 9.64e-163 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci5g1114 Pkinase 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1114 - - qsa:O6P43_032707 752.281