Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1099 ATGCTTCCTTTGGTTTTGTTGTTTCTTCTCCTTCTCTGTAGTCATCTTTCACCTGTGACTTCTCTAAATGCCGAGGGCTCTGTCCTTTTGGCTCTCAAGCAGTCTATCACAGACCCAGAAGGGTCTATGAGTAACTGGAATTTTTCCGACGAAAACCCATGTTCGTGGAATGGGGTTACATGCAAGGAACAGAGTGTTATTGGGATCGGTATTCCGAAGAGGAAGCTTTACGGCATCCTTCCTTCTTCTCTGGGATCTCTTTCTAAGCTTCGCCATGTAAATTTCAGGAACAATAAGCTCTTTGGGAAGTTGCCTCCAGAGCTATTCGCAGCCCAGGGACTGCAAAGTTTGGTCCTTTATGGTAATTCCTTTTCTGGGCCTGTTCCCCAGGAGATTGGGAAGCTCAGGTACCTTCAATTCTTAGATTTATCACAAAATTTCTTCAATGGGTCTTTACCTGCAGTAATTGTCCAATGCAAGAGACTGAGAACCCTTGTTCTGAGTCACAACAATTTCACTGGTCCCCTTCCGGATCGATTTGGTTCTGATTTGTTCTCTCTGGAAAAACTTGACCTTTCTTTCAATCACTTCAATGGTTCAATTCCTAGTGATATGGGGAATCTATCTAGCCTCCAAGGCACTGTAGATTTATCTCATAATAATTTTTCTGGCTTAATCCCACCCAGCCTTGGTAAATTGCCTGAGAAGGTTTATATTGATCTTACTTTCAACAATTTGAGTGGTCCGATACCACAAAATGGTGCTTTGATGAACAGAGGACCAACAGCTTTTATAGGCAACTCTGGTCTCTGTGGACCTCCTTTGAAGAAGCCGTGTTCTTCAGAAACTCCTGGTGCTAGCCCTTCTTCCTCATTACCATTTCTGCCAGACAACAACCCTCCTGGGGATTCTGATAATCCTTATGGCAGAAATGAGAAAACCAAAGGGTTAAGTAAAGGTGCTATTGTAGGCATTGTTGTGGGTGATGTAATTGGAATTTGCCTCTTAGGTCTGTTGTTCTCTTACTGCTACTCAAGGGTTTGTGGGTTTAAGGATAATGATGAATCTGGTGAGAAGGGAGATAGAAGTAGGAAAGAGTGTTTTTGCTTCAGAAAGGATGAATCTGAGACCTTATCTGAGAATGTTGAGCAATATGATCTTGTCCCATTGGATGCCCAAGTGGCATTTGATTTGGATGAGCTTCTCAAGGCTTCAGCTTTTGTTTTGGGAAAGAGTGGAATAGGCATTGTATACAAGGTGGTGCTTGAAGATGGGCTTACCTTAGCTGTGAGAAGATTAGGCGAAGGTGGTTCTCAAAGGTTTAAAGAATTCCAGACTGAAGTGGAAGCAATAGGGAGATTAAGGCATCCTAACATTGTTACCCTGAGAGCTTATTACTGGTCTGTTGATGAGAAACTTCTCATCTATGACTATATACCCAATGGAAACCTTGCTACAGCAATTCATGGGAAGGCTGGACTAATTGCATTCACGCCTCTCTCTTGGTCGGTTCGCCTAAAAATCATGAAAGGCATTGCAAAAGGATTGGTCTACCTGCACGAGTTTAGCCCCAAAAAATATGTTCATGGAGACCTAAAGCCAAGTAACATACTGCTTGGGCATAACATGGAACCCCACATATCTGATTTTGGACTTGGAAGACTTGCAAATATTGCTGGAGGTTCTCCAACCTTGCAATCCAATCGAGTTGCTGCCGAGAAACCCCATGAAAGGCAAAAGAGCTTAACTGCATCAGAAGTCTCAGCTAATGTTTTGGGAACCGGCTATCAGGCTCCAGAAGCATTGAAAGTGGTGAAGCCATCACAGAAATGGGACGTTTATTCATATGGTGTGATTTTGATAGAGATGATCACAGGAAGGTTGCCCATTGTCCATGTGGGAAGCTCAGAAATGGACCTTGTCCAATGGATTCAGTTCTGCATTGAGGAGAAGAAGCCACTCTCAGATGTAATAGACCCATATCTGCCAGAAGATGCAGACAAGGAAGAGGAGATTATTGCAGCTTTGAAGATTGCAATGGCTTGTGTCCATAGCAGCCCTGAGAAGAGACCGACAATGAGGCTTGTTCTTGATGCTTTAGATAGGTTGTCTGCTTCTTCTGATTGA 2127 0.4325 MLPLVLLFLLLLCSHLSPVTSLNAEGSVLLALKQSITDPEGSMSNWNFSDENPCSWNGVTCKEQSVIGIGIPKRKLYGILPSSLGSLSKLRHVNFRNNKLFGKLPPELFAAQGLQSLVLYGNSFSGPVPQEIGKLRYLQFLDLSQNFFNGSLPAVIVQCKRLRTLVLSHNNFTGPLPDRFGSDLFSLEKLDLSFNHFNGSIPSDMGNLSSLQGTVDLSHNNFSGLIPPSLGKLPEKVYIDLTFNNLSGPIPQNGALMNRGPTAFIGNSGLCGPPLKKPCSSETPGASPSSSLPFLPDNNPPGDSDNPYGRNEKTKGLSKGAIVGIVVGDVIGICLLGLLFSYCYSRVCGFKDNDESGEKGDRSRKECFCFRKDESETLSENVEQYDLVPLDAQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLRHPNIVTLRAYYWSVDEKLLIYDYIPNGNLATAIHGKAGLIAFTPLSWSVRLKIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPHERQKSLTASEVSANVLGTGYQAPEALKVVKPSQKWDVYSYGVILIEMITGRLPIVHVGSSEMDLVQWIQFCIEEKKPLSDVIDPYLPEDADKEEEIIAALKIAMACVHSSPEKRPTMRLVLDALDRLSASSD 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1099 708 FunFam Leucine-rich repeat protein kinase family protein 479 706 - -
Prci5g1099 708 MobiDBLite consensus disorder prediction 282 297 - -
Prci5g1099 708 SMART serkin_6 408 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1099 708 FunFam Leucine-rich repeat receptor-like protein kinase 386 478 - -
Prci5g1099 708 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Prci5g1099 708 SUPERFAMILY L domain-like 24 276 - -
Prci5g1099 708 Gene3D Phosphorylase Kinase; domain 1 371 478 - -
Prci5g1099 708 FunFam Leucine-rich repeat receptor-like protein kinase 22 178 - -
Prci5g1099 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Prci5g1099 708 Gene3D Ribonuclease Inhibitor 76 285 IPR032675 -
Prci5g1099 708 Gene3D Ribonuclease Inhibitor 19 75 IPR032675 -
Prci5g1099 708 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 160 705 IPR046959 -
Prci5g1099 708 MobiDBLite consensus disorder prediction 276 312 - -
Prci5g1099 708 FunFam Leucine-rich repeat receptor-like protein kinase 186 281 - -
Prci5g1099 708 SUPERFAMILY Protein kinase-like (PK-like) 408 700 IPR011009 -
Prci5g1099 708 Gene3D Transferase(Phosphotransferase) domain 1 479 708 - -
Prci5g1099 708 Pfam Protein kinase domain 409 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g1099 708 CDD STKc_IRAK 409 703 - -
Prci5g1099 708 ProSiteProfiles Protein kinase domain profile. 403 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1099 Prci-Chr5 29607260 29610100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1099 1 708 Receptor kinase-like Gene Family AT2G01210 68.011 0.0 989
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci5g1099 Pkinase 2.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1099 - - qsa:O6P43_025753 1099.73