Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1097 ATGGATTCAAACACTTCAAGCTTTGTTCTGAATTCTTCAACTTTTCACCCAGATTTCTACCAAGGCAAAGATGATAATGATGAGGATGGCATGATTGACCTGGGACTTAGCCTCAGAACTGTCCAGCCTGAAGCTTATCATTCTTCTAGCAACTTTTTAAGCTTGTGGAGATATGATGACCTCATGGATTGGCCTGAGTCTAATAATCTCAACCTCAAGAGCTCAAGCACAATGCATTCAAAATCCGTCCCAGAGAACTTTGATGAGGAAATAGAAGGTGTTCAGAGCAATGATAGGTGGGCTTATGTGAAAGTTATCATGGATGGTGTTACAGTAGGCAGAAAAATTTGTGTTCTTGATCATGAAGGATATCCAAGTCTTGCAAACCAGTTAGAAAACATGTTTGGAAGCAAATCTGTTTCTGGTTTGAAACTGTTCCAATCTGAGTCAGAGTATTTACTGTTCTACAAAGACAGAGAAGATCATTGGAGAACAGTAGGTGATGTCCCATGGAAAGAGTTTGTAGAAAGCGTGAAGAGGTTGAGGATTGCAAGAAAGAATACAACCTAA 570 0.3965 MDSNTSSFVLNSSTFHPDFYQGKDDNDEDGMIDLGLSLRTVQPEAYHSSSNFLSLWRYDDLMDWPESNNLNLKSSSTMHSKSVPENFDEEIEGVQSNDRWAYVKVIMDGVTVGRKICVLDHEGYPSLANQLENMFGSKSVSGLKLFQSESEYLLFYKDREDHWRTVGDVPWKEFVESVKRLRIARKNTT 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1097 189 Gene3D - 95 189 - -
Prci5g1097 189 ProSiteProfiles PB1 domain profile. 100 188 IPR000270 GO:0005515
Prci5g1097 189 SUPERFAMILY CAD & PB1 domains 99 183 - -
Prci5g1097 189 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 52 187 IPR003311 GO:0005634|GO:0006355
Prci5g1097 189 Pfam AUX/IAA family 82 186 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1097 Prci-Chr5 29599945 29601558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1097 95 183 B3 DNA Binding Superfamily AT1G59750 37.079 1.16e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci5g1097 AUX_IAA 2.6e-22 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1097 K14484 - gmx:100777024 272.322