Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1095 ATGATTGATAATGGGGGAAGGTTTCACTGTCTTCCATATTTCTACCAAGGCAAAGATGATAATGATGAGGATGGCATGATTGACCTGGGACTTAGCCTCAGAACTGTCCAGCCTGAAGCTTATCATTCTTCTAGCAACTTTTTAAGCTTGTGGAGATATGATGACCTCATGGATTGGCCTGAGTCTAATAATCTCAACCTCAAGAGCTCAAGCACAATGCATTCAAAATCCGTCCCAGAGAACTTTGATGAGGAAATAGAAGGTGTTCAGAGCAATGATAGGTGGGCTTATGTGAAAGTTATCATGGATGGTGTTACAGTAGGCAGAAAAATTTGTGTTCTTGATCATGAAGGATATCCAAGTCTTGCAAACCAGTTAGAAAACATGTTTGGAAGCAAATCTGTTTCTGGTTTGAAACTGTTCCAATCTGAGTCAGAGTATTTACTGTTCTACAAAGACAGAGAAGATCATTGGAGAACAGTAGGTGATGTCCCATGGAAAGAGTTTGTAGAAAGCGTGAAGAGGTTGAGGATTGCAAGAAAGAATACAACCTAA 555 0.4 MIDNGGRFHCLPYFYQGKDDNDEDGMIDLGLSLRTVQPEAYHSSSNFLSLWRYDDLMDWPESNNLNLKSSSTMHSKSVPENFDEEIEGVQSNDRWAYVKVIMDGVTVGRKICVLDHEGYPSLANQLENMFGSKSVSGLKLFQSESEYLLFYKDREDHWRTVGDVPWKEFVESVKRLRIARKNTT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1095 184 ProSiteProfiles PB1 domain profile. 95 183 IPR000270 GO:0005515
Prci5g1095 184 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 54 182 IPR003311 GO:0005634|GO:0006355
Prci5g1095 184 Pfam AUX/IAA family 77 181 IPR033389 -
Prci5g1095 184 Gene3D - 90 184 - -
Prci5g1095 184 SUPERFAMILY CAD & PB1 domains 94 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1095 Prci-Chr5 29599943 29601558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1095 61 178 B3 DNA Binding Superfamily AT1G59750 32.773 1.58e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Prci5g1095 AUX_IAA 2.4e-22 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1095 K14484 - gmx:100793397 249.21