Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1074 ATGAGGGGAGAACAAGGGAAAGTTTTGCTCGAGGACTTAAGATTTTGCTGGTTCATAATGATTCCTTGTCCATCGTCAGCTTGTCCTCTATGCTTGAGAAATACTCATTCAGAGGATACCATCCCAATATTGCAGCTGAACTCCTGGGTATTCTTGAGGACCTCAGCCTATGTTGGAATGAAAAATGCTCCCAAGTTAATGTCATCTACAACTCAATGGAGGCAGTCACACTCATTCAATATGACCATTTCCAAGATCACCCCTATCAAAAAGATCAGAGACTTTATCATGCAAATTTGGATCATCACATTCATTACTGTTACTGATGAGGCAAAAGCGGCTGTGTCCATGATCTGTCATTCTGAAGAAAGCCAATTCAACCTGGTAATGGCTAAAGCTAACATGCCTGACATGGATACCCTTTCATTTCTGGACTTCATGCTTGAAAAGTACGTCCCTGTCATCTTCATCTCTTCTGGAGAATATAAGGATGATGTAACATGGAAAGCATTGGCTAACGGCTCATGTTATTTCTTGGAAGAACCAGTCCTTTTACAGGATCTTAAATATGTGTGGCAGCATGTTTATCACACACAAGTCAACTTGGCCAACAGAACTCAAGAAGAAAATTGTGCAAACGAGGTTCATGGAACTCTTGATGATAGAAAATGTATGGAAAAAGAGAAGAGAAAAAGGTTCCATATGAATTTTGACAGCAATCACCTCACTGCTTTTATGGAGGAGGAGGAAGAGGAGGATACAGAAAGAGAACAAAACTATGATGAACATCCTGAGAAAAGGCCCCGTATTGTTTGGACTCCTGAGTTGCATCAGAAGTTCTTGGATGCCATTAATGTTTTGAGTGACGGGAATAATATTCGTCCAAAAGCTATACTTGAACAGATGAATGTGCCTAACCTCACAGCTCGCCAAATTTCAAGTCATCTTCAGAAATACAGAACTCAAGAATTGATAAACCAGCAGGCTTGCATGTCTGGATTCGCTCCAATGAGAAAATTTTCAAACCTTGATATTAGATCCCAGTCTTCCTCACCATTTCAGAGCCAAAGTTATCCAGGTTTTCCTATATCAATTGCAGCCCTTAGTGGGCGCCAAAATCAAAACCAGTGTTCAATGATTTTCATTGAAACTCAAGAATCTGACATGGCACAAATGGAAGAACCCGCGCCAATTCAAGATAAATTTCCAGCAGCATTGAGCAATTATGGAAGCCAAAACCTAGAAGCTGAAGTGGGACAACCTCTACCAGATGCTTCAATGGACCAAAACCAACCCATGACAGATGGTACTTTGACTATACTTGAGGAAGATTGTGAAGAACATGACTATTCTCAAAATGGAGTACTTCCAGATCAAATTGATCAATACTGTGAGATGCTAAGGAACACTCTTCTAAGAAATAATAATAGCACTCATCTTCAAGACCCTGATGTCTGA 1458 0.4026 MRGEQGKVLLEDLRFCWFIMIPCPSSACPLCLRNTHSEDTIPILQLNSWVFLRTSAYVGMKNAPKLMSSTTQWRQSHSFNMTISKITPIKKIRDFIMQIWIITFITVTDEAKAAVSMICHSEESQFNLVMAKANMPDMDTLSFLDFMLEKYVPVIFISSGEYKDDVTWKALANGSCYFLEEPVLLQDLKYVWQHVYHTQVNLANRTQEENCANEVHGTLDDRKCMEKEKRKRFHMNFDSNHLTAFMEEEEEEDTEREQNYDEHPEKRPRIVWTPELHQKFLDAINVLSDGNNIRPKAILEQMNVPNLTARQISSHLQKYRTQELINQQACMSGFAPMRKFSNLDIRSQSSSPFQSQSYPGFPISIAALSGRQNQNQCSMIFIETQESDMAQMEEPAPIQDKFPAALSNYGSQNLEAEVGQPLPDASMDQNQPMTDGTLTILEEDCEEHDYSQNGVLPDQIDQYCEMLRNTLLRNNNSTHLQDPDV 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1074 485 FunFam Two-component response regulator 263 324 - -
Prci5g1074 485 Pfam Myb-like DNA-binding domain 272 320 IPR001005 -
Prci5g1074 485 SUPERFAMILY CheY-like 110 203 IPR011006 -
Prci5g1074 485 Gene3D - 264 324 - -
Prci5g1074 485 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 244 415 IPR044841 GO:0003700|GO:0006355
Prci5g1074 485 Gene3D - 89 210 - -
Prci5g1074 485 MobiDBLite consensus disorder prediction 244 266 - -
Prci5g1074 485 NCBIfam myb-like DNA-binding domain, SHAQKYF class 268 322 IPR006447 GO:0003677
Prci5g1074 485 SUPERFAMILY Homeodomain-like 266 321 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1074 Prci-Chr5 29452468 29459476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1074 105 332 Response Regulator Gene Family AT2G25180 32.636 1.44e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Prci5g1074 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1074 - - pcin:129311678 963.37