Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1067 ATGGAGAGAGCTTGTGAATTCTGCACATCTTTGAGGCCAGTGGTTTATTGTAAAGCTGATGAAGCATATCTTTGTCTATCCTGTGATGCAAAGGTCCATAAAGCCAATGCACTGTCCAGCCGCCACCTCAGAACCCTTATATGTAACCTATGCAGAAACCATTTTGCTTATGCGCAGTGTTTGGATCACCAAATCCTGATCTGCCGCGGCTGTGATCAGAAGCTTCACGATCCCTCCTTGAAACACCAGAAACGAGCTATCAGAAGTTACATGGGTTGCCCTTCTGCCAAAGACTTTGCCGTACTTTGGGGTTTTGAATTGAATGAGATAGAAAACAGTGGTTCTGCAGATTTGAATGCAGTAAATCTCTCGGGACAATTTGGTGATAAAACTGGAGGCCATTCAGTGGTATCTAGGACTAAATTTGATGGTGGATCTAGCAGTCAACAAGGTCAGAAATTGTACAAAGATCGAGAGAGACAAGTTATTCTGCAGCAGATTATTGATTTGAAAAGGCTTCAACATAGTGAGAACAGTAATCATTCTCCACTGGTAACTGGGCTGCAAGAAACAGTCTCTTCTTCTTCAATGCACCATACTCGAAAGAACTATGATGATAAATGTGATCAGCATGCACAAAATCCCCAGGATTTTACTAATACTCTTCAGGAAAGAGACAGTCCCATGGCAGAGCTGAAGCTTGAAAGTTTGTCATCCACATTTTCTGAACTAGATAATTTACCTTCATCTCCAATGATAGACCTTCCCTTGAACAGTGAGTTCTCCTGGACCTGCAAAAGTCCACTTCAAAGTAATCAGATGTGGTCTCATAATATTCAAGACCTTGGGATATGTGAAGAACTTATTTGTCAAGATGATTTTAACATACCTGACGTTGACTTAACATTCCAAAACATTGAAGAATTATTTGGGGGAGATCAAGATCCAGTTAGAGGACTGGTTGGTGATAATGATATGTCCTGTTCTTCTATAGAGAAGGATATATCACTTGATAAGTCAGATATCTTCAATGAAAGAACAATGGAGGATTCTTCGGAAGCTGTATCAATTGCAATCTCCCAATCTGCTAATGAGGAAAAGGATATTGCTCCTCCCAGCCAGTATGATCTAATAAGCATAGATCTTCCTCAAAAAATTAGACCATCTCATTCAACTATGTCATTCTCTGTTTCAAGATTTAATGCTGAAAGCAGTTGTCCTGATCACCATGACACTGGTCTTTTTCCTCACAGTGAAGGGAACGGAAATTCTAGCAGTTTCCCAGAACTGGAAGTTTCAAACACGGAGACTGGAGGAAATGTCACTGTTAGGCGTGAAAAGCAAGCTCGAGTTCAATCCAGGAAACCTGTGGTTAATGTAAGAAAGAGGATGAAAGGCCAAGTTTCCAAAGCAGAAAGCTATTGA 1425 0.407 MERACEFCTSLRPVVYCKADEAYLCLSCDAKVHKANALSSRHLRTLICNLCRNHFAYAQCLDHQILICRGCDQKLHDPSLKHQKRAIRSYMGCPSAKDFAVLWGFELNEIENSGSADLNAVNLSGQFGDKTGGHSVVSRTKFDGGSSSQQGQKLYKDRERQVILQQIIDLKRLQHSENSNHSPLVTGLQETVSSSSMHHTRKNYDDKCDQHAQNPQDFTNTLQERDSPMAELKLESLSSTFSELDNLPSSPMIDLPLNSEFSWTCKSPLQSNQMWSHNIQDLGICEELICQDDFNIPDVDLTFQNIEELFGGDQDPVRGLVGDNDMSCSSIEKDISLDKSDIFNERTMEDSSEAVSIAISQSANEEKDIAPPSQYDLISIDLPQKIRPSHSTMSFSVSRFNAESSCPDHHDTGLFPHSEGNGNSSSFPELEVSNTETGGNVTVRREKQARVQSRKPVVNVRKRMKGQVSKAESY 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1067 474 SMART bboxneu5 1 47 IPR000315 GO:0008270
Prci5g1067 474 SMART bboxneu5 48 87 IPR000315 GO:0008270
Prci5g1067 474 MobiDBLite consensus disorder prediction 408 474 - -
Prci5g1067 474 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Prci5g1067 474 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 471 - -
Prci5g1067 474 MobiDBLite consensus disorder prediction 417 442 - -
Prci5g1067 474 CDD Bbox1_BBX-like 4 47 - -
Prci5g1067 474 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1067 Prci-Chr5 29432629 29436986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1067 1 317 C2C2-CO-like Transcription Factor Family AT1G68190 37.685 4.16e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1067 - - gmx:100819787 529.25