Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1061 ATGGGATTGCAGAACCACCTCCACGACGTCTCTTCCGATTCCATTCCCCTCCTCCTTCTCCTCCACCTCGCCGCCGGCTTCAATTATCTCCGCTCCATCCTTCTCGCCTTCCTCCACTCTCTCGGCTTCGACAGATTCCATGCCCACAGACCGCCCATCGTCGACGATGCCCTCCTCGCCACCGTCGGATCTGGTTTCGCCAGCCTTGTTGTACTTTCCGACCAGCTCCATGCGAACTATGATGTTCCCGACGACGACCACGAGATTGCGGCCTCCTCCATGTGTGTGGTGTGCCGGAGCAAGTACAAGGAGGGCGACCAGGTTCGGAGGCTGCCTTGCCACCACGCCTTCCATAGACGCTGCTTCGATGCTTGGCTTCACCAGCTCAAGTTTAACTGCCCTCTCTGTCGATCGACGCTCGTCTCTGATGAGCGCGTGGCCCTCACAGAGCGGCGAGTTGGTAGCCAAGTCTTATCCTGGTTTTCTTTGGAGTGA 495 0.5818 MGLQNHLHDVSSDSIPLLLLLHLAAGFNYLRSILLAFLHSLGFDRFHAHRPPIVDDALLATVGSGFASLVVLSDQLHANYDVPDDDHEIAASSMCVVCRSKYKEGDQVRRLPCHHAFHRRCFDAWLHQLKFNCPLCRSTLVSDERVALTERRVGSQVLSWFSLE 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1061 164 SUPERFAMILY RING/U-box 94 143 - -
Prci5g1061 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 69 148 - -
Prci5g1061 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 152 IPR013083 -
Prci5g1061 164 Pfam Ring finger domain 94 137 IPR001841 -
Prci5g1061 164 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Prci5g1061 164 SMART ring_2 95 136 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1061 Prci-Chr5 29331670 29332513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1061 1 163 C3H Transcription Factor Family AT1G15100 48.193 1.59e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1061 K16282 - gmx:100803789 192.2