Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g1041 ATGGGGCGAGAAAGTCACAAAATGAAGGCATTAAGCCTACTAAGAAGCAGAATCTGTGACCCCAAATTTATATTCAAGCCTTTCCACGATTCTCCGGACAGCAACCACAGTAAACTGAAATTCATGATATCAAGTTCCATTACTGAGGCATGCAATAATTCTATTCTGCTTCTTGGTCCCCGCGGCTCTGGGAAATCTGCGGTTTTGGAGCTCGTTCTTGGAGATTTATTGGTGGAGTATCCAGACATGATTTCAGTGATCAGGTTGAGTGGGCTTTTACATAGTGATGACAACTGTGCATTAAAGGAAGTAGCTAGGCAGTTATGCATGAAGCATCAACTGAAATTCTCAAAAGCGGCGTCATTTGACGACAACTCCCAATTCATGGTAGCCATGCTAAAGGAGTGCGGATTAGCACATAAAACAATTGTATTTATTCTGGATGAGTTTGACCTGTTTGCCCAGGGCAAACAGAGGTTGCTTTATAGCTTGCTAGATGCCATGCAATCAGTAACATCACAGGCTGTTGTAATTGGCATTAGTTGCCGGCTGGATGCAGACCAGCTGTTGGAAAAAAGAGTACGATCTCGTTTTTCACATAGAAAGTTATTATTCCTTCCACCTTCTATGGAAGACTCAAAGAGAATTTTGGAGCACATACTGTCTTTACCGATGGATTCAAGCCTTCCACATGATTACGCTGTTGAATTTAATAGAAAGATTCAAGATATATTAGAAGATAGAAGGTTCAAAGAAACCTTCAATAAATATTTGAATTTTGATTCCTCAGTTAAACAGTTACTGAGGTTTCTATTTTGTGCTGTCTCTTGTATGGATTTACAGACTGGCTTTTTGACATGCGAGAACTTTGAAACTGCATTCTCAAGTATCCTGAGGCAACCCAAACTGGAATGTTTGAAAAATTGCTCCATATTAGAACTTTACATCCTGGTTTGCATGAAGAGGTTGGAGGTAAAAGAACAGACCTTGTGCAACTTCAATTCTATAATGAAAGAGTATAAAATTATACACGATTCCTTCCAGACTTCTGACTATTATGCACGAAATGTCTGCTTAAGGGCATTTGAACATCTTATAAACCGTGAACTGGTATGTTTCACAGACAATAGAGGACACAATTTATCTGTCGAATTCCGTCCTGTAAAGCTTTTAATCTCTCCCGCTGAACTACACCAAGGACTAAAAGCATATCATTCATGCCCTGCCATTCTTCATAAGTTAATGGATCGCGAAGGCTAA 1260 0.396 MGRESHKMKALSLLRSRICDPKFIFKPFHDSPDSNHSKLKFMISSSITEACNNSILLLGPRGSGKSAVLELVLGDLLVEYPDMISVIRLSGLLHSDDNCALKEVARQLCMKHQLKFSKAASFDDNSQFMVAMLKECGLAHKTIVFILDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSKRILEHILSLPMDSSLPHDYAVEFNRKIQDILEDRRFKETFNKYLNFDSSVKQLLRFLFCAVSCMDLQTGFLTCENFETAFSSILRQPKLECLKNCSILELYILVCMKRLEVKEQTLCNFNSIMKEYKIIHDSFQTSDYYARNVCLRAFEHLINRELVCFTDNRGHNLSVEFRPVKLLISPAELHQGLKAYHSCPAILHKLMDREG 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g1041 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 261 IPR027417 -
Prci5g1041 419 Pfam AAA ATPase domain 38 173 IPR041664 -
Prci5g1041 419 Gene3D - 33 207 IPR027417 -
Prci5g1041 419 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 418 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Prci5g1041 419 FunFam Origin of replication complex subunit 4 33 207 - -
Prci5g1041 419 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 216 399 IPR032705 -
Prci5g1041 419 PIRSF ORC4 3 419 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g1041 Prci-Chr5 29092455 29097888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g1041 1 416 Core DNA Replication Machinery Family AT2G01120 64.066 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g1041 K02606 - gmx:100800582 664.455