Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0898 ATGGGCATGAAGAGCACAGGAGGAGAAATAGTTCAGGTTCAAGGAGGCCACATTGTTCGATCCACAGGTAGAAAAGATCGTCACAGTAAGGTGTACACTTCGAAAGGTCTTCGTGACCGAAGGGTTCGACTTTCAGCTCACACTGCCATTCAGTTCTACGATGTTCAAGACCGTCTCGGCTATGACCGACCCAGCAAGGCGGTGGATTGGCTCATCAAGAAGGCCAAATCCGCCATTGACAAACTCGGAGAGCTTCCTCCATGGCATCCGGCAGTTGGTAACACTACTGAAGAAGCTCCTGAAATAAGAATTGCAGAAGAAACTGAGTCTTCTGGTTACAACATTCAGCTTCAGAGACAGTTTTGTGAGAACCCAGATAACCATTCTGGTTTTATTTCGTCGCAGATGGGCACTGATGCCATAGCTTTCTTCCCCACGAGTTCTGCTACTATGAGTTCCTCTATCAATTTTCAGAACTACCCAGCTCATATAATCTCCAGAACCACCGACCCAGATGAAGATCTAGGACTTTCTCTTCATTCGTTTCAAGACCCAGGTCTGATTCATGGCCAATCATCACATGGAGACGCGAATAATCCCGCAGGATTTGTGACTTGGAACAACAACGACGCTTCTTCCATGTTAGTGGGGCAAGGCTCGACTACATTTTCTCAAAGGGGGACCCTTCAGTCCAGTTTTTCAGCATGGAATGACAATATTGCAATGACTTGTTCTTCCTCGGATCAGCAGCAGAACAAGTCTCAACAAGCTTCGATCTTTGGAAGCAGGTTTCTTCTGTCTGATGGAATGGGAATTCCTGGATTCTGCATTCCCGCGAGAATTCAAGGCCAAGAGGATGATGGAATTGCATCTGATCACAGGCCATCTTCTTCTTCTTCCCCTAATTCTCTTCACTGA 918 0.4662 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTSKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLGELPPWHPAVGNTTEEAPEIRIAEETESSGYNIQLQRQFCENPDNHSGFISSQMGTDAIAFFPTSSATMSSSINFQNYPAHIISRTTDPDEDLGLSLHSFQDPGLIHGQSSHGDANNPAGFVTWNNNDASSMLVGQGSTTFSQRGTLQSSFSAWNDNIAMTCSSSDQQQNKSQQASIFGSRFLLSDGMGIPGFCIPARIQGQEDDGIASDHRPSSSSSPNSLH 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0898 305 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Prci5g0898 305 MobiDBLite consensus disorder prediction 282 305 - -
Prci5g0898 305 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 250 IPR005333 GO:0003700
Prci5g0898 305 Pfam TCP family transcription factor 23 110 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0898 Prci-Chr5 24618054 24620152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0898 8 300 TCP Transcription Factor Family AT3G15030 39.196 2.24e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci5g0898 TCP 5.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0898 - - gmx:100814907 353.214