Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0879 ATGGAAAAAACCAGCAAGCCTCAAGAATTCTGCGATAACTATCACAGAAAGATACAACGAATCAACACGACACTTTCTTCGAAGATATCATCGTCCATGGAAGAAGAACAAGAACAACGCAGAAACAGAGCTGCTTCAACCTCACACGGTTCAATATCGGTGATAGGAAGGCGGAGGACAATGGAGGACACCGTGAAGGCAATACCAGGATTCATCGGAAGCTATGACTTTTTCGCAGTTTACGACGGTCACGGCGGGTCCACGGTGGCCGATGCTTGCCGTGACAGGATGCACGTGTTGGTGGCAGAGCAAGTGAAGAAGGAGGGAGCTAATTATCAGAAGAGAGGATTGGATTATTGGCATGAAGCGATGTGCTCTTCCTTCATGAGGATGGACCGTGAAGTCGGAGAATGTGGCAGCAAAGATGACAACATGGTGGGTTCCACGGCGGCGGCGGTCATCGTCGGCAGCGATGAGCTTGTCGTCGCTAACTGTGGAGACTCAAGAGCTGTACTTTGCCGTGGAGGTATTGCCCTCCCACTTTCAACAGACCATAAGTCAAATCGTCCAGATGAAAGAAAAAGGGTGGAAACAGCCGGAGGAACAGTAATAAGTTGGAACGGGGATCGTATCTTAGGAGTACTAGCCACTTCCAGGTCCATAGGGGACCATTGTATGAAGCCATATGTAGTATCAGAGCCAGAGGTGAAGGTGTATGAAAGAACAGAGAGAGACGAGTTTATGGATAGCGACAGGTTGTGGGATGTGATATCCAACAAGTTGGCTTGTGAGGTGGTGAGGCGGATTTTTAAGATGAGGTTCGTAAAGAATGCAGCATCACAAGCTGCTGCATTGCTAGCAGAGTTGGCTGTGGCTCGTGGAAGCAGAGATAATATCAGTGTTGTTGTAGTCCAACTTAACTAG 924 0.4838 MEKTSKPQEFCDNYHRKIQRINTTLSSKISSSMEEEQEQRRNRAASTSHGSISVIGRRRTMEDTVKAIPGFIGSYDFFAVYDGHGGSTVADACRDRMHVLVAEQVKKEGANYQKRGLDYWHEAMCSSFMRMDREVGECGSKDDNMVGSTAAAVIVGSDELVVANCGDSRAVLCRGGIALPLSTDHKSNRPDERKRVETAGGTVISWNGDRILGVLATSRSIGDHCMKPYVVSEPEVKVYERTERDEFMVXSDRLWDVISNKLACEVVRRIFKMRFVKNAASQAAALLAELAVARGSRDNISVVVVQLN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0879 308 CDD PP2Cc 48 307 IPR001932 -
Prci5g0879 308 SUPERFAMILY PP2C-like 45 308 IPR036457 -
Prci5g0879 308 MobiDBLite consensus disorder prediction 28 52 - -
Prci5g0879 308 ProSitePatterns PPM-type phosphatase domain signature. 77 85 IPR000222 GO:0043169
Prci5g0879 308 PANTHER PROTEIN PHOSPHATASE 38 306 IPR015655 GO:0004722|GO:0006470
Prci5g0879 308 SMART PP2C_4 38 305 IPR001932 -
Prci5g0879 308 Pfam Protein phosphatase 2C 50 300 IPR001932 -
Prci5g0879 308 Gene3D - 8 308 IPR036457 -
Prci5g0879 308 ProSiteProfiles PPM-type phosphatase domain profile. 48 307 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0879 Prci-Chr5 24149828 24152128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0879 13 307 PP2C-type Phosphatase Gene Family AT2G29380 43.210 6.78e-77 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0879 K14497 - gmx:100785905 340.117