Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0873 ATGGCATCCAAGGATCCTCCACCGTCTTTGGAGATATTAGTTCGGACACCCGATAACTTCTCAATCTGGAGCGGACTCCCCTTCCCCAATGCTCAACCTGGTGTCAAGCTTGACAAAGGCTCTTGTTTGAATGCAAAATTCTGTGATAATGGGTCCAGACTCTTAGTCATGAAATCTAACTCTGTTATTACTGTATATGATTGTGCAAACTTTCAAGAGATTAGATCTTTTGAGATACATTATGTTGCTGCTGCCATCTTGTCTCCTTGTGGTACTTACTTGCTAACCTTTCAAAGGCCCTTGGCTCCCCAAGACAAGAATGTGACTTTATGGAAGACTGAGACTGGGGATCCTGTTTACCAACACTCCCAAAAGAACATGACTAAAACCACATGGCCCTCGATCCAATTTAGCTCTGATGAAACTGTTGCATGCCGGATGGCAACTAATGAGGTTCAATTTTTTGACACGGGTGATTTCTCTAAAGGAATTATCTATCGATTGAAAGTTCCAGGAGTTGCTGCAATTGAGCTTTCTAGGACCCCTGGATCTCATGTAGCTGTATTAGTTCCAGAATCCAAGGGGGTTCCTGCTAGTGTACAGATATTTTCTTGTGAAAAAGATTCTCAAAGTCAACCTATTGCCCGACGAAATTTTTTTCGATGCTCAACTGTCCAGTTTAATTGGAATCATGGATCTTCTGGACTTCTAGTGGTGGTGCAATCAGATGTTGATAAAACCAACCAGAGTTACTTTGGAGAATCAAAGTTATGCTACCTGACAACAGATGGGACTCAAGAAACAGTTGTGGCTCTTCGTAAAGAGGGACCTGTTCATGATGCCCAGTGGTCATGTTCTGGCTTGGAATTTGGTGTTTTATATGGTTTTATACCTGCTTCTGCAACTGTGTTTAACAAGAAGGGAAGACCCATACATGAGCTTGGCAGTGGTCCTTACAATACAATTCGATGGAACCCAAAAGGAAAGTTCTTAGTTTTGGCTGGGTTTGGTAACCTACCGGGTGATATGGAATTCTGGGATTATGTAGAGGCAAAAAAGATTCGAAAAACAAAGGCTGAATGGTCTGTGACTAGTGAATGGTCTCCTGATGGATGCTATTTCATGACCGCCACAACTGCTCCAAGGCTTCAAGTTGATAATGGGATCAAGATTTTCAACCATGATGGGTCATTGTACTTCGAGAAGAAGTTTGACAAGTTGTTCCAGGCTGACTGGAAACCAGAGTCACCCAATAAGTTTGGTGACATTACTGAATTAATTAAATCTCTGGGCACAGTAAAAATTGAAGATAGCAAACGACCAGGTCAAGGACCAACAGTAACCAAAGCTGCATACTGCCCTCCACATGCTAAGAAGGCAGCTGCTATTCAGGCAGAGTTGTTAGGAATGGACCCCACAGAATCAAGTAGCATGAGCAAGAATGCATTGCGAAACAAGAAAAAGAGGGAGCGACAAAGAGAGAAGAAGGCTGCCGAAGCTATCGGTTCTTCGTGA 1515 0.4284 MASKDPPPSLEILVRTPDNFSIWSGLPFPNAQPGVKLDKGSCLNAKFCDNGSRLLVMKSNSVITVYDCANFQEIRSFEIHYVAAAILSPCGTYLLTFQRPLAPQDKNVTLWKTETGDPVYQHSQKNMTKTTWPSIQFSSDETVACRMATNEVQFFDTGDFSKGIIYRLKVPGVAAIELSRTPGSHVAVLVPESKGVPASVQIFSCEKDSQSQPIARRNFFRCSTVQFNWNHGSSGLLVVVQSDVDKTNQSYFGESKLCYLTTDGTQETVVALRKEGPVHDAQWSCSGLEFGVLYGFIPASATVFNKKGRPIHELGSGPYNTIRWNPKGKFLVLAGFGNLPGDMEFWDYVEAKKIRKTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFNHDGSLYFEKKFDKLFQADWKPESPNKFGDITELIKSLGTVKIEDSKRPGQGPTVTKAAYCPPHAKKAAAIQAELLGMDPTESSSMSKNALRNKKKRERQREKKAAEAIGSS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0873 504 SUPERFAMILY WD40 repeat-like 39 395 IPR036322 GO:0005515
Prci5g0873 504 PIRSF Transl_init_eIF2A 5 504 IPR011387 GO:0003743|GO:0006413
Prci5g0873 504 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
Prci5g0873 504 Coils Coil 480 500 - -
Prci5g0873 504 MobiDBLite consensus disorder prediction 468 504 - -
Prci5g0873 504 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 498 IPR011387 GO:0003743|GO:0006413
Prci5g0873 504 Gene3D - 39 409 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0873 Prci-Chr5 23943379 23949566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0873 11 418 Eukaryotic Initiation Factors Gene Family AT5G27640 22.603 6.84e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0873 K15026 - jre:108982788 750.355