Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0872 ATGGCATCCAAGGATCCTCCACCGTCTTTGGAGATATTAGTTCGGACACCCGATAACTTCTCAATCTGGAGCGGACTCCCCTTCCCCAATGCTCAACCTGGTGTCAAGCTTGACAAAGGCTCTTGTTTGAATGCAAAATTCTGTGATAATGGGTCCAGACTCTTAGTCATGAAATCTAACTCTGTTATTACTGTATATGATTGTGCAAACTTTCAAGAGATTAGATCTTTTGAGATACATTATGTTGCTGCTGCCATCTTGTCTCCTTGTGGTACTTACTTGCTAACCTTTCAAAGGCCCTTGGCTCCCCAAGACAAGAATGTGACTTTATGGAAGACTGAGACTGGGGATCCTGTTTACCAACACTCCCAAAAGAACATGACTAAAACCACATGGCCCTCGATCCAATTTAGCTCTGATGAAACTGTTGCATGCCGGATGGCAACTAATGAGGTTCAATTTTTTGACACGGGTGATTTCTCTAAAGGAATTATCTATCGATTGAAAGTTCCAGGAGTTGCTGCAATTGAGCTTTCTAGGACCCCTGGATCTCATGTAGCTGTATTAGTTCCAGAATCCAAGGGGGTTCCTGCTAGTGTACAGATATTTTCTTGTGAAAAAGATTCTCAAAGTCAACCTATTGCCCGACGAAATTTTTTTCGATGCTCAACTGTCCAGTTTAATTGGAATCATGGATCTTCTGGACTTCTAGTGGTGGTGCAATCAGATGTTGATAAAACCAACCAGAGTTACTTTGGAGAATCAAAGTTATGCTACCTGACAACAGATGGGACTCAAGAAACAGTAAAGAGGGACCTGTTCATGATGCCCAGTGGTCATGTTCTGGCTTGGAATTTGGTGTTTTATATGGTTTTATACCTGCTTCTGCAACTGTGTTTAACAAGAAGGGAAGACCCATACATGAGCTTGGCAGTGGTCCTTACAATACAATTCGATGGAACCCAAAAGGAAAGTGTATCCTTGGCTGATGAAGTGCCTTTGTTTTTATGTCCATTGTTTTTTTTTAAAAAATACATCCATATTTGGGTAAAAGCAAACTATTCTATGACTTTTTGGCCCTTGACAACTGGTTTTTCAGTCTTAGTTTTGGCTGGGTTTGGTAACCTACCGGGTGATATGGAATTCTGGGATTATGTAGAGGCAAAAAAGATTCGAAAAACAAAGGCTGAATGGTCTGTGACTAGTGAATGGTCTCCTGATGGATGCTATTTCATGACCGCCACAACTGCTCCAAGGCTTCAAGTTGATAATGGGATCAAGATTTTCAACCATGATGGGTCATTGTACTTCGAGAAGAAGTTTGACAAGTTGTTCCAGGCTGACTGGAAACCAGAGTCACCCAATAAGTTTGGTGACATTACTGAATTAATTAAATCTCTGGGCACAGTAAAAATTGAAGATAGCAAACGACCAGGTCAAGGACCAACAGTAACCAAAGCTGCATACTGCCCTCCACATGCTAAGAAGGCAGCTGCTATTCAGGCAGAGTTGTTAGGAATGGACCCCACAGAATCAAGTAGCATGAGCAAGAATGCATTGCGAAACAAGAAAAAGAGGGAGCGACAAAGAGAGAAGAAGGCTGCCGAAGCTATCGGTTCTTCGTGA 1626 0.42 MASKDPPPSLEILVRTPDNFSIWSGLPFPNAQPGVKLDKGSCLNAKFCDNGSRLLVMKSNSVITVYDCANFQEIRSFEIHYVAAAILSPCGTYLLTFQRPLAPQDKNVTLWKTETGDPVYQHSQKNMTKTTWPSIQFSSDETVACRMATNEVQFFDTGDFSKGIIYRLKVPGVAAIELSRTPGSHVAVLVPESKGVPASVQIFSCEKDSQSQPIARRNFFRCSTVQFNWNHGSSGLLVVVQSDVDKTNQSYFGESKLCYLTTDGTQETVKRDLFMMPSGHVLAWNLVFYMVLYLLLQLCLTRREDPYMSLAVVLTIQFDGTQKESVSLADEVPLFLCPLFFFKKYIHIWVKANYSMTFWPLTTGFSVLVLAGFGNLPGDMEFWDYVEAKKIRKTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFNHDGSLYFEKKFDKLFQADWKPESPNKFGDITELIKSLGTVKIEDSKRPGQGPTVTKAAYCPPHAKKAAAIQAELLGMDPTESSSMSKNALRNKKKRERQREKKAAEAIGSS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0872 541 SUPERFAMILY Tricorn protease domain 2 38 421 - -
Prci5g0872 541 Gene3D - 20 248 IPR015943 GO:0005515
Prci5g0872 541 MobiDBLite consensus disorder prediction 505 541 - -
Prci5g0872 541 Coils Coil 517 537 - -
Prci5g0872 541 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 268 IPR011387 GO:0003743|GO:0006413
Prci5g0872 541 Pfam Eukaryotic translation initiation factor eIF2A 366 447 IPR013979 -
Prci5g0872 541 Pfam Eukaryotic translation initiation factor eIF2A 217 269 IPR013979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0872 Prci-Chr5 23943376 23949566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0872 51 455 Eukaryotic Initiation Factors Gene Family AT5G27640 20.602 8.56e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0872 K15026 - qsa:O6P43_028073 624.78