Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0857 ATGTGTGTAGATTGCACAATGCACACGCACGACTTGACGCTCATCAGTGAAGTGCCGAAATTGGTGTGCTATTCCATTCTTTCCTCTGCAATCTTCTTGTTTATTTGCTTTCACACCATCATCAGGAGTTCAAGTCAATTGAAGCCGATCCGTTTTCTTCTTAGCGCTCTCGGAAATTTAGGCGAATTTGCTGTTAGCTGTGTACTCTGTGCAAGGGAAATGACTTACAACAGCACAAATGGAAGTTCTTGCCCGCTACCAATGAAATCCACTTCAAATGGTGGATTTCAAGGAGATAATCCTCTTGATTATGCACTTTCTCTGGCTATTTTGCAGATATGTCTTGTCGTTCTAGTCACAAGGGGACTGGCATATCTTTTAAAGCCTTTAAGGCAGCCACGCGTGATTGCTGAGATTGTGGGAGGAATATTACTCGGACCATCAGCCTTGGGACGGAGTAAAAGCTATTTGCATGCAGTTTTCCCACCCACAAGTCTGACAGTATTAGATACTCTAGCAAATATCGGGCTTATATTTTTTCTTTTCCTAGCAGGGCTAGAGTTAGATCCTAAATCTCTGCATGAAACAGGAAAGCAGGCCCTTGCCATTGCTGTTGCTGGAATATGCCTCCCTTTTGCATTAGGAATTGGTACATCATATGTTCTCCGAGAAACAATTGCTAAAGATGTGGATAGTACGGCATTTCTTGTATTTATGGGTGTGGCCCTCTCCATCACTGCTTTTCCTGTATTAGCTCGTATTCTGGCTGAGTTGAAACTCCTAACCACCAACGTTGGAAGAATGGCTATGTCGGCTGCTGCAGTTAATGATGTAGCTGCATGGATTTTGCTTGCTCTGGCTATTGCACTATCTGGCAAGAGTCAATCTTCACTTGTGCCAGTATGGGTCTTCTTATGTGGGTTTGGTTTTGTTACTTGTTCAAGCATCACTGTCCCTCGTCTCTTCAGATGGATGGCCAAACGATGCCCTGAGGGTGAACCAATCGAAGAGACATACATATGTGCTACACTAGTTGTCGTTCTGGCTGCAGGGTTTGCTACAGATGCCATTGGAATTCATGCCATGTTTGGTGCTTTTGTTGTTGGAGTTTTGATTCCAAAAGATGGACCATTCGCCGGTGCTCTTGTGGAGAAAGTAGAGGATCTACTATCAAGTCTTTTTCTCCCATTGTACTTTGTGTCAAGTGGATTGAAGACTAACATAGCCACTATTCAGGGGCTGCAATCATGGGGTCTTCTAGTTTTAGTGATATTTACTGCTTGTTTTGGGAAGATTGTTGGCACTATTGTAGTGTCTCGTTTCTGTAAGGTACCATTGAATGAAGCTTTGGTGATGGGATTCTTAATGAATAGTAAAGGCTTGGTCGAATTAATTGTCCTCAACATTGGCAAAGATAGGAAGGTCTTGAATGATCAGACCTTTGCCATTATGGTTCTTATGGCACTCTTTACTACCTTCATCACAACCCCTATTGTCATTTCTTTGTATAAGCCAGCAAGAAAGGCAAAAATTGCTGATTACAAGTACAGAACAATTGAAAGGAAAAATCCTAACAGCCAGCTTAGGGTTCTTTCATGTTTCCATAGTGCGAGAAGTATTCCATCAGTGATAAATCTGATTGAATCTTCAAGAGGAATCCAGAAACGTGATGCACTTTGTGTATATGCAATGCACCTTAAAGAATTTTCTGAAAGGTCATCAACCATATTAATGGTACACAAGGCAAGAAAAAATGGGTTGCCCTTCTGGAACAAGCGCCGCCATGCTGATTCTGATCATGTTATTGTGGCATTTGAGGCATACCAGCAGCTAAGCCAAGTGTCTGTCCGGCCAATGATAGCGATATCATCCATGGCTGACATGCACGAAGATATTTGCACGACAGCTGAGAGAAAGAGAGTCGCGGTCATTATTCTCCCATTCCATAAACATCAAAGATTGGGTGGTTCACTGGAGACCACGCGCAATGATTTCAGATGGGTTAACAAAAGAGTATTGGACCACGCTCCCTGCTCAGTTGGAATTTTTGTTGATCGTGGGCTTGGCGGTGCTTACCATGTATCCGCAAGTAATGTCTCTTACTGTGTCACCGTACTTTTCTTTGGAGGTGAAGATGATCGTGAAGCCCTTGCATACGGACTTCGTATCGCCGAGCACCCTGGCATAAGATTAGTCGTTGTGCGTTTTGTTTTGGATCCAAACCTTGAAGGAGAGATTGTTAGAGTTGATGTGGACAACTCTGGCACCAAAGTAGTCCCAGAAGATGAGGAATTCCTGAATGACTTAAAGAAGAAAGAAGCCAATGATGACTCAATCAACTACACAGAGAAAGTAGTTAAAAATAGTGCAGAAACAATTATTGCTATACATGAGTTTAATTGTTGCAATCTGTTTCTCGTGGGTGCAAGGCCAAATAATGAAGTAGCCTTTGCTTTGCAAAAAAGTGAATGCCCAGAACTTGGTCCTATTGGTGCTTTATTGGCATCTCATGACTTTCATACAACAGCTTCAGTTTTGGTGATGCAACAGTATCACAATGGAATGTCAAATAATTCCACCTCAGAGATAGAGCCACAGTTAACTCTTGATGACTCAGAATCAACTTGA 2628 0.4243 MCVDCTMHTHDLTLISEVPKLVCYSILSSAIFLFICFHTIIRSSSQLKPIRFLLSALGNLGEFAVSCVLCAREMTYNSTNGSSCPLPMKSTSNGGFQGDNPLDYALSLAILQICLVVLVTRGLAYLLKPLRQPRVIAEIVGGILLGPSALGRSKSYLHAVFPPTSLTVLDTLANIGLIFFLFLAGLELDPKSLHETGKQALAIAVAGICLPFALGIGTSYVLRETIAKDVDSTAFLVFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDVAAWILLALAIALSGKSQSSLVPVWVFLCGFGFVTCSSITVPRLFRWMAKRCPEGEPIEETYICATLVVVLAAGFATDAIGIHAMFGAFVVGVLIPKDGPFAGALVEKVEDLLSSLFLPLYFVSSGLKTNIATIQGLQSWGLLVLVIFTACFGKIVGTIVVSRFCKVPLNEALVMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVISLYKPARKAKIADYKYRTIERKNPNSQLRVLSCFHSARSIPSVINLIESSRGIQKRDALCVYAMHLKEFSERSSTILMVHKARKNGLPFWNKRRHADSDHVIVAFEAYQQLSQVSVRPMIAISSMADMHEDICTTAERKRVAVIILPFHKHQRLGGSLETTRNDFRWVNKRVLDHAPCSVGIFVDRGLGGAYHVSASNVSYCVTVLFFGGEDDREALAYGLRIAEHPGIRLVVVRFVLDPNLEGEIVRVDVDNSGTKVVPEDEEFLNDLKKKEANDDSINYTEKVVKNSAETIIAIHEFNCCNLFLVGARPNNEVAFALQKSECPELGPIGALLASHDFHTTASVLVMQQYHNGMSNNSTSEIEPQLTLDDSEST 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0857 875 Gene3D - 107 512 IPR038770 -
Prci5g0857 875 MobiDBLite consensus disorder prediction 855 875 - -
Prci5g0857 875 PANTHER CATION/H + ANTIPORTER 83 852 - -
Prci5g0857 875 Gene3D - 557 825 - -
Prci5g0857 875 FunFam Cation/H(+) antiporter 15 108 510 - -
Prci5g0857 875 Pfam Sodium/hydrogen exchanger family 114 498 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0857 Prci-Chr5 23345407 23349215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0857 74 874 Antiporter Super Family AT5G41610 68.311 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0857 K26731 - qsa:O6P43_034300 1222.99