Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0856 ATGTGTGTAGATTGCACAATGCACACGCACGACTTGACGCTCATCAGTGAAGTGCCGAAATTGGTGTGCTATTCCATTCTTTCCTCTGCAATCTTCTTGTTTATTTGCTTTCACACCATCATCAGGAGTTCAAGTCAATTGAAGCCGATCCGTTTTCTTCTTAGCGCTCTCGGTGACTTGCTAGATGCCTTTCTCTTCAGAAATTTAGGCGAATTTGCTGTTAGCTGTGTACTCTGTGCAAGGGAAATGACTTACAACAGCACAAATGGAAGTTCTTGCCCGCTACCAATGAAATCCACTTCAAATGGTGGATTTCAAGGAGATAATCCTCTTGATTATGCACTTTCTCTGGCTATTTTGCAGATATGTCTTGTCGTTCTAGTCACAAGGGGACTGGCATATCTTTTAAAGCCTTTAAGGCAGCCACGCGTGATTGCTGAGATTGTGGGAGGAATATTACTCGGACCATCAGCCTTGGGACGGAGTAAAAGCTATTTGCATGCAGTTTTCCCACCCACAAGTCTGACAGTATTAGATACTCTAGCAAATATCGGGCTTATATTTTTTCTTTTCCTAGCAGGGCTAGAGTTAGATCCTAAATCTCTGCATGAAACAGGAAAGCAGGCCCTTGCCATTGCTGTTGCTGGAATATGCCTCCCTTTTGCATTAGGAATTGGTACATCATATGTTCTCCGAGAAACAATTGCTAAAGATGTGGATAGTACGGCATTTCTTGTATTTATGGGTGTGGCCCTCTCCATCACTGCTTTTCCTGTATTAGCTCGTATTCTGGCTGAGTTGAAACTCCTAACCACCAACGTTGGAAGAATGGCTATGTCGGCTGCTGCAGTTAATGATGTAGCTGCATGGATTTTGCTTGCTCTGGCTATTGCACTATCTGGCAAGAGTCAATCTTCACTTGTGCCAGTATGGGTCTTCTTATGTGGGTTTGGTTTTGTTACTTGTTCAAGCATCACTGTCCCTCGTCTCTTCAGATGGATGGCCAAACGATGCCCTGAGGGTGAACCAATCGAAGAGACATACATATGTGCTACACTAGTTGTCGTTCTGGCTGCAGGGTTTGCTACAGATGCCATTGGAATTCATGCCATGTTTGGTGCTTTTGTTGTTGGAGTTTTGATTCCAAAAGATGGACCATTCGCCGGTGCTCTTGTGGAGAAAGTAGAGGATCTACTATCAAGTCTTTTTCTCCCATTGTACTTTGTGTCAAGTGGATTGAAGACTAACATAGCCACTATTCAGGGGCTGCAATCATGGGGTCTTCTAGTTTTAGTGATATTTACTGCTTGTTTTGGGAAGATTGTTGGCACTATTGTAGTGTCTCGTTTCTGTAAGGTACCATTGAATGAAGCTTTGGTGATGGGATTCTTAATGAATAGTAAAGGCTTGGTCGAATTAATTGTCCTCAACATTGGCAAAGATAGGAAGGTCTTGAATGATCAGACCTTTGCCATTATGGTTCTTATGGCACTCTTTACTACCTTCATCACAACCCCTATTGTCATTTCTTTGTATAAGCCAGCAAGAAAGGCAAAAATTGCTGATTACAAGTACAGAACAATTGAAAGGAAAAATCCTAACAGCCAGCTTAGGGTTCTTTCATGTTTCCATAGTGCGAGAAGTATTCCATCAGTGATAAATCTGATTGAATCTTCAAGAGGAATCCAGAAACGTGATGCACTTTGTGTATATGCAATGCACCTTAAAGAATTTTCTGAAAGGTCATCAACCATATTAATGGTACACAAGGCAAGAAAAAATGGGTTGCCCTTCTGGAACAAGCGCCGCCATGCTGATTCTGATCATGTTATTGTGGCATTTGAGGCATACCAGCAGCTAAGCCAAGTGTCTGTCCGGCCAATGATAGCGATATCATCCATGGCTGACATGCACGAAGATATTTGCACGACAGCTGAGAGAAAGAGAGTCGCGGTCATTATTCTCCCATTCCATAAACATCAAAGATTGGGTGGTTCACTGGAGACCACGCGCAATGATTTCAGATGGGTTAACAAAAGAGTATTGGACCACGCTCCCTGCTCAGTTGGAATTTTTGTTGATCGTGGGCTTGGCGGTGCTTACCATGTATCCGCAAGTAATGTCTCTTACTGTGTCACCGTACTTTTCTTTGGAGGTGAAGATGATCGTGAAGCCCTTGCATACGGACTTCGTATCGCCGAGCACCCTGGCATAAGATTAGTCGTTGTGCGTTTTGTTTTGGATCCAAACCTTGAAGGAGAGATTGTTAGAGTTGATGTGGACAACTCTGGCACCAAAGTAGTCCCAGAAGATGAGGAATTCCTGAATGACTTAAAGAAGAAAGAAGCCAATGATGACTCAATCAACTACACAGAGAAAGTAGTTAAAAATAGTGCAGAAACAATTATTGCTATACATGAGTTTAATTGTTGCAATCTGTTTCTCGTGGGTGCAAGGCCAAATAATGAAGTAGCCTTTGCTTTGCAAAAAAGTGAATGCCCAGAACTTGGTCCTATTGGTGCTTTATTGGCATCTCATGACTTTCATACAACAGCTTCAGTTTTGGTGATGCAACAGTATCACAATGGAATGTCAAATAATTCCACCTCAGAGATAGAGCCACAGTTAACTCTTGATGACTCAGAATCAACTTGA 2655 0.4245 MCVDCTMHTHDLTLISEVPKLVCYSILSSAIFLFICFHTIIRSSSQLKPIRFLLSALGDLLDAFLFRNLGEFAVSCVLCAREMTYNSTNGSSCPLPMKSTSNGGFQGDNPLDYALSLAILQICLVVLVTRGLAYLLKPLRQPRVIAEIVGGILLGPSALGRSKSYLHAVFPPTSLTVLDTLANIGLIFFLFLAGLELDPKSLHETGKQALAIAVAGICLPFALGIGTSYVLRETIAKDVDSTAFLVFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDVAAWILLALAIALSGKSQSSLVPVWVFLCGFGFVTCSSITVPRLFRWMAKRCPEGEPIEETYICATLVVVLAAGFATDAIGIHAMFGAFVVGVLIPKDGPFAGALVEKVEDLLSSLFLPLYFVSSGLKTNIATIQGLQSWGLLVLVIFTACFGKIVGTIVVSRFCKVPLNEALVMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVISLYKPARKAKIADYKYRTIERKNPNSQLRVLSCFHSARSIPSVINLIESSRGIQKRDALCVYAMHLKEFSERSSTILMVHKARKNGLPFWNKRRHADSDHVIVAFEAYQQLSQVSVRPMIAISSMADMHEDICTTAERKRVAVIILPFHKHQRLGGSLETTRNDFRWVNKRVLDHAPCSVGIFVDRGLGGAYHVSASNVSYCVTVLFFGGEDDREALAYGLRIAEHPGIRLVVVRFVLDPNLEGEIVRVDVDNSGTKVVPEDEEFLNDLKKKEANDDSINYTEKVVKNSAETIIAIHEFNCCNLFLVGARPNNEVAFALQKSECPELGPIGALLASHDFHTTASVLVMQQYHNGMSNNSTSEIEPQLTLDDSEST 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0856 884 Gene3D - 116 521 IPR038770 -
Prci5g0856 884 MobiDBLite consensus disorder prediction 864 884 - -
Prci5g0856 884 Gene3D - 566 834 - -
Prci5g0856 884 PANTHER CATION/H + ANTIPORTER 92 861 - -
Prci5g0856 884 FunFam Cation/H(+) antiporter 15 117 519 - -
Prci5g0856 884 Pfam Sodium/hydrogen exchanger family 123 507 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0856 Prci-Chr5 23345407 23349215 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0856 83 883 Antiporter Super Family AT5G41610 68.311 0.0 1090