Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0854 ATGTGTGTAGATTGCACAATGCACACGCACGACTTGACGCTCATCAGTGAAGTGCCGAAATTGGTGTGCTATTCCATTCTTTCCTCTGCAATCTTCTTGTTTATTTGCTTTCACACCATCATCAGGAGTTCAAGTCAATTGAAGCCGATCCGTTTTCTTCTTAGCGCTCTCGGTTCCTTGACTGCGAAAATTTCGAGCGCTATATTGTTCTCGTTCAAATGTTTGGATCACAACAGAAATTTAGGCGAATTTGCTGTTAGCTGTGTACTCTGTGCAAGGGAAATGACTTACAACAGCACAAATGGAAGTTCTTGCCCGCTACCAATGAAATCCACTTCAAATGGTGGATTTCAAGGAGATAATCCTCTTGATTATGCACTTTCTCTGGCTATTTTGCAGATATGTCTTGTCGTTCTAGTCACAAGGGGACTGGCATATCTTTTAAAGCCTTTAAGGCAGCCACGCGTGATTGCTGAGATTGTGGGAGGAATATTACTCGGACCATCAGCCTTGGGACGGAGTAAAAGCTATTTGCATGCAGTTTTCCCACCCACAAGTCTGACAGTATTAGATACTCTAGCAAATATCGGGCTTATATTTTTTCTTTTCCTAGCAGGGCTAGAGTTAGATCCTAAATCTCTGCATGAAACAGGAAAGCAGGCCCTTGCCATTGCTGTTGCTGGAATATGCCTCCCTTTTGCATTAGGAATTGGTACATCATATGTTCTCCGAGAAACAATTGCTAAAGATGTGGATAGTACGGCATTTCTTGTATTTATGGGTGTGGCCCTCTCCATCACTGCTTTTCCTGTATTAGCTCGTATTCTGGCTGAGTTGAAACTCCTAACCACCAACGTTGGAAGAATGGCTATGTCGGCTGCTGCAGTTAATGATGTAGCTGCATGGATTTTGCTTGCTCTGGCTATTGCACTATCTGGCAAGAGTCAATCTTCACTTGTGCCAGTATGGGTCTTCTTATGTGGGTTTGGTTTTGTTACTTGTTCAAGCATCACTGTCCCTCGTCTCTTCAGATGGATGGCCAAACGATGCCCTGAGGGTGAACCAATCGAAGAGACATACATATGTGCTACACTAGTTGTCGTTCTGGCTGCAGGGTTTGCTACAGATGCCATTGGAATTCATGCCATGTTTGGTGCTTTTGTTGTTGGAGTTTTGATTCCAAAAGATGGACCATTCGCCGGTGCTCTTGTGGAGAAAGTAGAGGATCTACTATCAAGTCTTTTTCTCCCATTGTACTTTGTGTCAAGTGGATTGAAGACTAACATAGCCACTATTCAGGGGCTGCAATCATGGGGTCTTCTAGTTTTAGTGATATTTACTGCTTGTTTTGGGAAGATTGTTGGCACTATTGTAGTGTCTCGTTTCTGTAAGGTACCATTGAATGAAGCTTTGGTGATGGGATTCTTAATGAATAGTAAAGGCTTGGTCGAATTAATTGTCCTCAACATTGGCAAAGATAGGAAGGTCTTGAATGATCAGACCTTTGCCATTATGGTTCTTATGGCACTCTTTACTACCTTCATCACAACCCCTATTGTCATTTCTTTGTATAAGCCAGCAAGAAAGGCAAAAATTGCTGATTACAAGTACAGAACAATTGAAAGGAAAAATCCTAACAGCCAGCTTAGGGTTCTTTCATGTTTCCATAGTGCGAGAAGTATTCCATCAGTGATAAATCTGATTGAATCTTCAAGAGGAATCCAGAAACGTGATGCACTTTGTGTATATGCAATGCACCTTAAAGAATTTTCTGAAAGGTCATCAACCATATTAATGGTACACAAGGCAAGAAAAAATGGGTTGCCCTTCTGGAACAAGCGCCGCCATGCTGATTCTGATCATGTTATTGTGGCATTTGAGGCATACCAGCAGCTAAGCCAAGTGTCTGTCCGGCCAATGATAGCGATATCATCCATGGCTGACATGCACGAAGATATTTGCACGACAGCTGAGAGAAAGAGAGTCGCGGTCATTATTCTCCCATTCCATAAACATCAAAGATTGGGTGGTTCACTGGAGACCACGCGCAATGATTTCAGATGGGTTAACAAAAGAGTATTGGACCACGCTCCCTGCTCAGTTGGAATTTTTGTTGATCGTGGGCTTGGCGGTGCTTACCATGTATCCGCAAGTAATGTCTCTTACTGTGTCACCGTACTTTTCTTTGGAGGTGAAGATGATCGTGAAGCCCTTGCATACGGACTTCGTATCGCCGAGCACCCTGGCATAAGATTAGTCGTTGTGCGTTTTGTTTTGGATCCAAACCTTGAAGGAGAGATTGTTAGAGTTGATGTGGACAACTCTGGCACCAAAGTAGTCCCAGAAGATGAGGAATTCCTGAATGACTTAAAGAAGAAAGAAGCCAATGATGACTCAATCAACTACACAGAGAAAGTAGTTAAAAATAGTGCAGAAACAATTATTGCTATACATGAGTTTAATTGTTGCAATCTGTTTCTCGTGGGTGCAAGGCCAAATAATGAAGTAGCCTTTGCTTTGCAAAAAAGTGAATGCCCAGAACTTGGTCCTATTGGTGCTTTATTGGCATCTCATGACTTTCATACAACAGCTTCAGTTTTGGTGATGCAACAGTATCACAATGGAATGTCAAATAATTCCACCTCAGAGATAGAGCCACAGTTAACTCTTGATGACTCAGAATCAACTTGA 2691 0.4236 MCVDCTMHTHDLTLISEVPKLVCYSILSSAIFLFICFHTIIRSSSQLKPIRFLLSALGSLTAKISSAILFSFKCLDHNRNLGEFAVSCVLCAREMTYNSTNGSSCPLPMKSTSNGGFQGDNPLDYALSLAILQICLVVLVTRGLAYLLKPLRQPRVIAEIVGGILLGPSALGRSKSYLHAVFPPTSLTVLDTLANIGLIFFLFLAGLELDPKSLHETGKQALAIAVAGICLPFALGIGTSYVLRETIAKDVDSTAFLVFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDVAAWILLALAIALSGKSQSSLVPVWVFLCGFGFVTCSSITVPRLFRWMAKRCPEGEPIEETYICATLVVVLAAGFATDAIGIHAMFGAFVVGVLIPKDGPFAGALVEKVEDLLSSLFLPLYFVSSGLKTNIATIQGLQSWGLLVLVIFTACFGKIVGTIVVSRFCKVPLNEALVMGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFITTPIVISLYKPARKAKIADYKYRTIERKNPNSQLRVLSCFHSARSIPSVINLIESSRGIQKRDALCVYAMHLKEFSERSSTILMVHKARKNGLPFWNKRRHADSDHVIVAFEAYQQLSQVSVRPMIAISSMADMHEDICTTAERKRVAVIILPFHKHQRLGGSLETTRNDFRWVNKRVLDHAPCSVGIFVDRGLGGAYHVSASNVSYCVTVLFFGGEDDREALAYGLRIAEHPGIRLVVVRFVLDPNLEGEIVRVDVDNSGTKVVPEDEEFLNDLKKKEANDDSINYTEKVVKNSAETIIAIHEFNCCNLFLVGARPNNEVAFALQKSECPELGPIGALLASHDFHTTASVLVMQQYHNGMSNNSTSEIEPQLTLDDSEST 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0854 896 Pfam Sodium/hydrogen exchanger family 135 519 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci5g0854 896 PANTHER CATION/H + ANTIPORTER 104 873 - -
Prci5g0854 896 MobiDBLite consensus disorder prediction 876 896 - -
Prci5g0854 896 Gene3D - 578 846 - -
Prci5g0854 896 FunFam Cation/H(+) antiporter 15 129 531 - -
Prci5g0854 896 Gene3D - 128 533 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0854 Prci-Chr5 23345407 23349215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0854 95 895 Antiporter Super Family AT5G41610 68.311 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0854 K26731 - qsa:O6P43_034300 1222.99