Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0848 ATGGGGAATTGCAGTGGCGTAGCCTCCGGGCATAGCCAACCGGACCACTCTAACGCCACTCACTCCGGCCTCCCTCCGCACCAACGTAACAATGGCATCTCCGTCCTTCCTCCTGATTCCAACCCCTCTCGTCCTCCTCCACCACCTAAACCAGCACTCTCTTCTGTTGTCGGACGCGTCCTTGGCCGGCCCATGGAGGATGTGCGTTCCACCTATATCTTCGGCCGTGAACTCGGTCGTGGTCAATTTGGTGTCACCTACCTAGTCACCCACAAAGTAACGAAGGAACAATTCGCCTGTAAATCCATCGCTGCACGCAAACTGATTAACCGCGACGACTTGGAAGACATTTGCCGCGAGGTCCAGATCATGCACCACCTCACCGGTCATCGCAACATTGTGGAGCTTAAGGGAGCTTACGAGGATCGTCACTCTGTTAATTTAATCATGGAGCTTTGTGCTGGCGGGGAGCTGTTCGATCGGATCATAGCCAAAGGGCACTACTCGGAGCGAGCCGCTGCTTATTTATGTCGCCAGATCGTGACGGTTGTGCATGATTGTCACACCATGGGAGTTATACATAGAGATTTGAAGCCTGAGAATTTCTTATTCCTGTGTAAGGAGGAGAGTTCACCTCTTAAGGCCACTGATTTTGGCCTCTCTGTATTTTTCAAGCCAGGAGATGCATTTAAAGATCTTGTTGGGAGTGCATATTACGTTGCTCCTGAGGTGCTGCGTAGAAGCTACGGACCTGAAGTAGATATTTGGAGTGCCGGGGTTATATTATACATTCTTCTCTGTGGTGTCCCACCCTTCTGGGCAGAAAATGAACAGGATATCTTCAATTCAATTCTTCGCGGGCATATTGATTTTGCGTCAGATCCTTGGCCTTCCATTTCAAGTAGTGCCAAAGACCTCATCAAGAAGATGCTACAAGCTAATCCAAAAGAAAGGTTTTCAGCAGTTGAAGTCCTTATTCTATCCAGAATGAAACAATTCCAGGCAATGAACAAGCTGAAGAAAGTAGCTCTGAAGGTAATTGCTGAAAATCTGTCTCAGGAAGAAATTATTGGCTTAAAGGAAATGTTTAAATCCATGGACACAGATAACAGTGGAACAATCACTTATGATGAGTTAAAAGCTGGTCTCCACAAACTGGGTAGTAAACTTTCTGAGTCTGAAATAAGGCAGCTGATGGAAGCGGCTGATGTAGATGGAAATGGAGCCATTGATTATATTGAGTTTATATCAGCAACCATGCATATGAATAGAATGGAAAGAGAGGACCATCTATACAAAGCCTTTGAATATTTTGACAAGGACAAGAGCGGGTATATCACGAAGGAAGAATTGGAATCTGCCCTTAGGAAGTATAATATGGGTGATGAGAAAACTTTAAAGGAGATCATTGCTGAAGTTGACTCAGACAATGATGGAAAAATTAACTACGATGAATTCGTAGCCATGATGAGGAAAGGCAACCCGGACTTCGTGAACAGACGTCGCTAA 1509 0.4579 MGNCSGVASGHSQPDHSNATHSGLPPHQRNNGISVLPPDSNPSRPPPPPKPALSSVVGRVLGRPMEDVRSTYIFGRELGRGQFGVTYLVTHKVTKEQFACKSIAARKLINRDDLEDICREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIIAKGHYSERAAAYLCRQIVTVVHDCHTMGVIHRDLKPENFLFLCKEESSPLKATDFGLSVFFKPGDAFKDLVGSAYYVAPEVLRRSYGPEVDIWSAGVILYILLCGVPPFWAENEQDIFNSILRGHIDFASDPWPSISSSAKDLIKKMLQANPKERFSAVEVLILSRMKQFQAMNKLKKVALKVIAENLSQEEIIGLKEMFKSMDTDNSGTITYDELKAGLHKLGSKLSESEIRQLMEAADVDGNGAIDYIEFISATMHMNRMEREDHLYKAFEYFDKDKSGYITKEELESALRKYNMGDEKTLKEIIAEVDSDNDGKINYDEFVAMMRKGNPDFVNRRR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0848 502 ProSiteProfiles Protein kinase domain profile. 72 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0848 502 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Prci5g0848 502 Gene3D Transferase(Phosphotransferase) domain 1 158 332 - -
Prci5g0848 502 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Prci5g0848 502 FunFam Calcium-dependent protein kinase 1 320 494 - -
Prci5g0848 502 MobiDBLite consensus disorder prediction 1 38 - -
Prci5g0848 502 SUPERFAMILY EF-hand 350 491 IPR011992 -
Prci5g0848 502 FunFam calcium-dependent protein kinase 1 158 336 - -
Prci5g0848 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Prci5g0848 502 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Prci5g0848 502 SUPERFAMILY Protein kinase-like (PK-like) 69 331 IPR011009 -
Prci5g0848 502 CDD STKc_CAMK 72 325 - -
Prci5g0848 502 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Prci5g0848 502 Gene3D Phosphorylase Kinase; domain 1 74 157 - -
Prci5g0848 502 FunFam Calcium-dependent protein kinase 1 74 157 - -
Prci5g0848 502 Pfam EF-hand domain pair 359 419 IPR002048 GO:0005509
Prci5g0848 502 Pfam EF-hand domain pair 429 491 IPR002048 GO:0005509
Prci5g0848 502 ProSiteProfiles EF-hand calcium-binding domain profile. 462 496 IPR002048 GO:0005509
Prci5g0848 502 PANTHER SERINE/THREONINE-PROTEIN KINASE 69 486 - -
Prci5g0848 502 Gene3D - 333 490 - -
Prci5g0848 502 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Prci5g0848 502 Gene3D - 352 420 - -
Prci5g0848 502 SMART serkin_6 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0848 502 ProSitePatterns Protein kinases ATP-binding region signature. 78 107 IPR017441 GO:0005524
Prci5g0848 502 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Prci5g0848 502 SMART efh_1 394 422 IPR002048 GO:0005509
Prci5g0848 502 SMART efh_1 465 493 IPR002048 GO:0005509
Prci5g0848 502 SMART efh_1 358 386 IPR002048 GO:0005509
Prci5g0848 502 SMART efh_1 430 458 IPR002048 GO:0005509
Prci5g0848 502 MobiDBLite consensus disorder prediction 39 53 - -
Prci5g0848 502 MobiDBLite consensus disorder prediction 1 55 - -
Prci5g0848 502 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Prci5g0848 502 Pfam Protein kinase domain 74 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0848 Prci-Chr5 23272571 23282904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0848 58 502 EF-hand Containing Proteins AT4G23650 75.054 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci5g0848 Pkinase 2.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0848 K13412 - qsa:O6P43_034294 832.787