Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0844 ATGGAACAGAAAGGCTTGTTGATCTCAGCGTTGAGTGTTGGGGTTGGAGTTGGGGTGGGTATAGGGTTGGCTTCTGGGCAAAGCGTAAGCAAATGGGGAGCCAATACCGGTTCCTCAAACGCCCTTACTGCAGAAAAGATAGAGCAAGAAATGCTTCGATTGGTTGTTGATGGCAGAGAAACCAAAGTCACCTTCGATCAATTCCCTTATTATCTCAGTGAGCAGACACGCGTGTTGCTGACAAGTGCTGCTTATGTTCATTTAAAACATGCTGAGGTCTCTAAATTTACTCGGAATCTTTCTCCTGCAAGCCGGACTATTCTACTCTCCGGACCAGCAGAACTTTACCAACAGGTGCTTGCCAAGGCTTTAGCTCATTACTTTGAAGCGAAGTTGCTTCTGTTGGATTTAACTGACTTTTCATTGAAGATCCAAAGTAGATATGGTTCTGGCAACAAAGAATCCGTTTTTAAAAGGTCCACTTCAGAGTCAACTTTGGAGAGACTATCTGGCTTATTTGAATCATTTTCTATCTTTCCACAGAAGGGGGAACCTAAAGTTGCAGGAAAGATCATCAGACAAAGCAGTGGAGTGGACCTCAGATCAATGGGGACTGATGCATCTTGCAATGCTCCTAAAATTCGTCGGAATGCTTCTGCCTCTGCAAATATCAGTAGCCTTGCCTTGCAAAATGCTCCTTCTAATCCAGGTTACTTCAAGAACTTATGGAATCGAATCAATGATGGTCCTCTTAAGCGCACAAGCAGTTGGTCATTCAATGAAAAGCTTCTTATACAATCTCTTTACAAGGTCCTTAGTTATGTGTCAAAAACTTACCCCATCGTGTTGTACCTGCGGGATGTTGATAAGTTGCTAAATAGATCACAAAGGACTTACAAGTTGTTACAAAAAATGCTGGAGAAACTATGTGGACCAGTTTTAATTCTCGGTTCACGAGTTCTGGATTCTGTTAATGACTACAATGAGGTAGACGAGAAACTTGCTTCAGTCTTCCCTTACAACATCAAAATTAGACCTCCAGATGATGAATCGCATCCTGTCAGCTGGAAAACTCAACTTGAAGAGGATATGAAAAAGATACAGGTTCAGGATAACAAAAATCATATTTTGGAAGTACTTGCTGCCAATGATCTTGAGTGCGATGATCTAGATTCCATCTGTGTGGCAGACACAATGGTTCTCAGCAATTACATAGAAGAGATTGTTGTGTCAGCAATTTCTTATCATTTAATGAAAAACAAAGACCCAGAGTACAGAAATGGGAAACTTGTTATTTCATGCAATAGTTTATCCCGAGCGTTGGGTATATTCCAAGACGGAAAATCCAATGGAAGAGATACATCAAAATTGGAAGCTCAAGATGTGAAATCTGAGAAGGAAATAAGGGAAGGTGCTGCTGTGAAGCCTGAAGCAAAGTCTGAAAATGGTGCTCCAGAAAAGAAAACTGAAGGAGCAGCGAGAGCTTCAGTGGCAAAGGCTGATAATGCAACTTCAGTTCCTCCAGAACCCAAAGTCGTTGAACCTCCTCCAGATAATGAGTTTGAGAAGCGCATAAGGGCAGAGGTAATACCAGCAAATGAGATTAATGTGACATTTTCTGATATTGGTGCCTTAGAAGAGACAAAAGAATCCCTTCAAGAACTGGTGATGCTTCCACTACGAAGGCCGGACCTTTTCACCGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTGTTTGGTCCTCCTGGCACAGGGAAGACAATGCTGGCTAAGGCCATTGCAAGGGAGGCTGGAGCGAGCTTCATCAATGTATCCATGTCTACCATAACTTCCAAATGGTTCGGTGAAGATGAAAAGAATGTTCGAGCTTTGTTCACACTGGCAGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTCGATAGCATGCTTGGCCAACGCACAAGAGTTGGAGAGCATGAAGCCATGAGAAAAATAAAGAATGAATTCATGGCTCATTGGGATGGCCTTATGACAAAACCAGATCAGCGCATCCTTGTTCTTGCTGCAACCAACAGGCCCTTTGATCTAGATGAAGCCATTATCAGGCGATTCGAAAGAAGAATTATGGTAGGGCTTCCATCTGCAGAAAACAGGGAAAAGATTTTGAGGACTCTTTTGTCTAAAGAAAAGGTAGACGATCAAGTTGACTTTAAGGAGCTAGCAACTATGACAGAAGGATATACTGGAAGTGATTTGAAGAATCTATGCACAACTACTGCTTATCGGCCTGTTAGAGAGTTAATTCAGCAGGAGAGACTGAAGACTCTGAAGAAGAAGCAGAAAGCTGCTAATAAAGATGTACAAGACAGACATAGAGAACAATCTACAACGGAAGATGCCCCAGATGCTGTGAATGCACAAGAGGAAGTTGAACAGGAAAGAGTTATTGTCCTTAGGCCATTGAACATGCAGGACTTCAGAGAGGCCAAAAATCAGGTTGCTGCAAGCTTTGCAGCTGAGGGAGCAGGAATGAGTGAGTTGAAGCAGTGGAATGACTTATATGGTGAAGGTGGTTCAAGAAAGAAACAGCAATTAAGTTACTTCCTATGA 2598 0.4246 MEQKGLLISALSVGVGVGVGIGLASGQSVSKWGANTGSSNALTAEKIEQEMLRLVVDGRETKVTFDQFPYYLSEQTRVLLTSAAYVHLKHAEVSKFTRNLSPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQSRYGSGNKESVFKRSTSESTLERLSGLFESFSIFPQKGEPKVAGKIIRQSSGVDLRSMGTDASCNAPKIRRNASASANISSLALQNAPSNPGYFKNLWNRINDGPLKRTSSWSFNEKLLIQSLYKVLSYVSKTYPIVLYLRDVDKLLNRSQRTYKLLQKMLEKLCGPVLILGSRVLDSVNDYNEVDEKLASVFPYNIKIRPPDDESHPVSWKTQLEEDMKKIQVQDNKNHILEVLAANDLECDDLDSICVADTMVLSNYIEEIVVSAISYHLMKNKDPEYRNGKLVISCNSLSRALGIFQDGKSNGRDTSKLEAQDVKSEKEIREGAAVKPEAKSENGAPEKKTEGAARASVAKADNATSVPPEPKVVEPPPDNEFEKRIRAEVIPANEINVTFSDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLMTKPDQRILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREKILRTLLSKEKVDDQVDFKELATMTEGYTGSDLKNLCTTTAYRPVRELIQQERLKTLKKKQKAANKDVQDRHREQSTTEDAPDAVNAQEEVEQERVIVLRPLNMQDFREAKNQVAASFAAEGAGMSELKQWNDLYGEGGSRKKQQLSYFL 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0844 865 SMART AAA_5 573 710 IPR003593 GO:0016887
Prci5g0844 865 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 46 864 - -
Prci5g0844 865 MobiDBLite consensus disorder prediction 448 519 - -
Prci5g0844 865 MobiDBLite consensus disorder prediction 773 794 - -
Prci5g0844 865 Gene3D - 536 797 IPR027417 -
Prci5g0844 865 MobiDBLite consensus disorder prediction 451 494 - -
Prci5g0844 865 Gene3D - 709 793 - -
Prci5g0844 865 MobiDBLite consensus disorder prediction 773 805 - -
Prci5g0844 865 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 536 711 - -
Prci5g0844 865 ProSitePatterns AAA-protein family signature. 680 699 IPR003960 GO:0005524|GO:0016887
Prci5g0844 865 Pfam ATPase family associated with various cellular activities (AAA) 577 707 IPR003959 GO:0005524|GO:0016887
Prci5g0844 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 363 IPR027417 -
Prci5g0844 865 Pfam AAA+ lid domain 731 770 IPR041569 -
Prci5g0844 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 536 775 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0844 Prci-Chr5 23224739 23231400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0844 537 769 Calmodulin-binding Proteins AT3G56690 37.712 1.58e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0844 - - pcin:129311736 1632.85