Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0842 ATGGAACAGAAAGGCTTGTTGATCTCAGCGTTGAGTGTTGGGGTTGGAGTTGGGGTGGGTATAGGGTTGGCTTCTGGGCAAAGCGTAAGCAAATGGGGAGCCAATACCGGTTCCTCAAACGCCCTTACTGCAGAAAAGATAGAGCAAGAAATGCTTCGATTGGTTGTTGATGGCAGAGAAACCAAAGTCACCTTCGATCAATTCCCTTATTATCTCAGTGAGCAGACACGCGTGTTGCTGACAAGTGCTGCTTATGTTCATTTAAAACATGCTGAGGTCTCTAAATTTACTCGGAATCTTTCTCCTGCAAGCCGGACTATTCTACTCTCCGGACCAGCAGAACTTTACCAACAGGTGCTTGCCAAGGCTTTAGCTCATTACTTTGAAGCGAAGTTGCTTCTGTTGGATTTAACTGACTTTTCATTGAAGATCCAAAGTAGATATGGTTCTGGCAACAAAGAATCCGTTTTTAAAAGGTCCACTTCAGAGTCAACTTTGGAGAGACTATCTGGCTTATTTGAATCATTTTCTATCTTTCCACAGAAGGGGGAACCTAAAGGAAAGATCATCAGACAAAGCAGTGGAGTGGACCTCAGATCAATGGGGACTGATGCATCTTGCAATGCTCCTAAAATTCGTCGGAATGCTTCTGCCTCTGCAAATATCAGTAGCCTTGCCTTGCAAAATGCTCCTTCTAATCCAGGTTACTTCAAGAACTTATGGAATCGAATCAATGATGGTCCTCTTAAGCGCACAAGCAGTTGGTCATTCAATGAAAAGCTTCTTATACAATCTCTTTACAAGGTCCTTAGTTATGTGTCAAAAACTTACCCCATCGTGTTGTACCTGCGGGATGTTGATAAGTTGCTAAATAGATCACAAAGGACTTACAAGTTGTTACAAAAAATGCTGGAGAAACTATGTGGACCAGTTTTAATTCTCGGTTCACGAGTTCTGGATTCTGTTAATGACTACAATGAGGTAGACGAGAAACTTGCTTCAGTCTTCCCTTACAACATCAAAATTAGACCTCCAGATGATGAATCGCATCCTGTCAGCTGGAAAACTCAACTTGAAGAGGATATGAAAAAGATACAGGTTCAGGATAACAAAAATCATATTTTGGAAGTACTTGCTGCCAATGATCTTGAGTGCGATGATCTAGATTCCATCTGTGTGGCAGACACAATGGTTCTCAGCAATTACATAGAAGAGATTGTTGTGTCAGCAATTTCTTATCATTTAATGAAAAACAAAGACCCAGAGTACAGAAATGGGAAACTTGTTATTTCATGCAATAGTTTATCCCGAGCGTTGGGTATATTCCAAGACGGAAAATCCAATGGAAGAGATACATCAAAATTGGAAGCTCAAGATGTGAAATCTGAGAAGGAAATAAGGGAAGGTGCTGCTGTGAAGCCTGAAGCAAAGTCTGAAAATGGTGCTCCAGAAAAGAAAACTGAAGGAGCAGCGAGAGCTTCAGTGGCAAAGGCTGATAATGCAACTTCAGTTCCTCCAGAACCCAAAGTCGTTGAACCTCCTCCAGATAATGAGTTTGAGAAGCGCATAAGGGCAGAGGTAATACCAGCAAATGAGATTAATGTGACATTTTCTGATATTGGTGCCTTAGAAGAGACAAAAGAATCCCTTCAAGAACTGGTGATGCTTCCACTACGAAGGCCGGACCTTTTCACCGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTGTTTGGTCCTCCTGGCACAGGGAAGACAATGCTGGCTAAGGCCATTGCAAGGGAGGCTGGAGCGAGCTTCATCAATGTATCCATGTCTACCATAACTTCCAAATGGTTCGGTGAAGATGAAAAGAATGTTCGAGCTTTGTTCACACTGGCAGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTCGATAGCATGCTTGGCCAACGCACAAGAGTTGGAGAGCATGAAGCCATGAGAAAAATAAAGAATGAATTCATGGCTCATTGGGATGGCCTTATGACAAAACCAGATCAGCGCATCCTTGTTCTTGCTGCAACCAACAGGCCCTTTGATCTAGATGAAGCCATTATCAGGCGATTCGAAAGAAGAATTATGGTAGGGCTTCCATCTGCAGAAAACAGGGAAAAGATTTTGAGGACTCTTTTGTCTAAAGAAAAGGTAGACGATCAAGTTGACTTTAAGGAGCTAGCAACTATGACAGAAGGATATACTGGAAGTGATTTGAAGAATCTATGCACAACTACTGCTTATCGGCCTGTTAGAGAGTTAATTCAGCAGGAGAGACTGAAGACTCTGAAGAAGAAGCAGAAAGCTGCTAATAAAGATGTACAAGACAGACATAGAGAACAATCTACAACGGAAGATGCCCCAGATGCTGTGAATGCACAAGAGGAAGTTGAACAGGAAAGAGTTATTGTCCTTAGGCCATTGAACATGCAGGACTTCAGAGAGGCCAAAAATCAGGTTGCTGCAAGCTTTGCAGCTGAGGGAGCAGGAATGAGTGAGTTGAAGCAGTGGAATGACTTATATGGTGAAGGTGGTTCAAGAAAGAAACAGCAATTAAGTTACTTCCTATGA 2592 0.4244 MEQKGLLISALSVGVGVGVGIGLASGQSVSKWGANTGSSNALTAEKIEQEMLRLVVDGRETKVTFDQFPYYLSEQTRVLLTSAAYVHLKHAEVSKFTRNLSPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQSRYGSGNKESVFKRSTSESTLERLSGLFESFSIFPQKGEPKGKIIRQSSGVDLRSMGTDASCNAPKIRRNASASANISSLALQNAPSNPGYFKNLWNRINDGPLKRTSSWSFNEKLLIQSLYKVLSYVSKTYPIVLYLRDVDKLLNRSQRTYKLLQKMLEKLCGPVLILGSRVLDSVNDYNEVDEKLASVFPYNIKIRPPDDESHPVSWKTQLEEDMKKIQVQDNKNHILEVLAANDLECDDLDSICVADTMVLSNYIEEIVVSAISYHLMKNKDPEYRNGKLVISCNSLSRALGIFQDGKSNGRDTSKLEAQDVKSEKEIREGAAVKPEAKSENGAPEKKTEGAARASVAKADNATSVPPEPKVVEPPPDNEFEKRIRAEVIPANEINVTFSDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLMTKPDQRILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREKILRTLLSKEKVDDQVDFKELATMTEGYTGSDLKNLCTTTAYRPVRELIQQERLKTLKKKQKAANKDVQDRHREQSTTEDAPDAVNAQEEVEQERVIVLRPLNMQDFREAKNQVAASFAAEGAGMSELKQWNDLYGEGGSRKKQQLSYFL 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0842 863 Pfam AAA+ lid domain 729 768 IPR041569 -
Prci5g0842 863 MobiDBLite consensus disorder prediction 771 803 - -
Prci5g0842 863 ProSitePatterns AAA-protein family signature. 678 697 IPR003960 GO:0005524|GO:0016887
Prci5g0842 863 Gene3D - 707 791 - -
Prci5g0842 863 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 46 862 - -
Prci5g0842 863 MobiDBLite consensus disorder prediction 771 792 - -
Prci5g0842 863 MobiDBLite consensus disorder prediction 446 517 - -
Prci5g0842 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 364 IPR027417 -
Prci5g0842 863 Gene3D - 534 795 IPR027417 -
Prci5g0842 863 Pfam ATPase family associated with various cellular activities (AAA) 575 705 IPR003959 GO:0005524|GO:0016887
Prci5g0842 863 SMART AAA_5 571 708 IPR003593 GO:0016887
Prci5g0842 863 MobiDBLite consensus disorder prediction 449 492 - -
Prci5g0842 863 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 534 709 - -
Prci5g0842 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 534 773 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0842 Prci-Chr5 23224739 23231400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0842 535 767 Calmodulin-binding Proteins AT3G56690 37.712 1.61e-41 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0842 - - pcin:129311736 1624.76