Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0841 ATGGAACAGAAAGGCTTGTTGATCTCAGCGTTGAGTGTTGGGGTTGGAGTTGGGGTGGGTATAGGGTTGGCTTCTGGGCAAAGCGTAAGCAAATGGGGAGCCAATACCGGTTCCTCAAACGCCCTTACTGCAGAAAAGATAGAGCAAGAAATGCTTCGATTGGTTGTTGATGGCAGAGAAACCAAAGTCACCTTCGATCAATTCCCTTATTATCTCAGTGAGCAGACACGCGTGTTGCTGACAAGTGCTGCTTATGTTCATTTAAAACATGCTGAGGTCTCTAAATTTACTCGGAATCTTTCTCCTGCAAGCCGGACTATTCTACTCTCCGGACCAGCAGAACTTTACCAACAGGTGCTTGCCAAGGCTTTAGCTCATTACTTTGAAGCGAAGTTGCTTCTGTTGGATTTAACTGACTTTTCATTGAAGATCCAAAGTAGATATGGTTCTGGCAACAAAGAATCCGTTTTTAAAAGGTCCACTTCAGAGTCAACTTTGGAGAGACTATCTGGCTTATTTGAATCATTTTCTATCTTTCCACAGAAGGGGGAACCTAAAGGAAAGATCATCAGACAAAGCAGTGGAGTGGACCTCAGATCAATGGGGACTGATGCATCTTGCAATGCTCCTAAAATTCGTCGGAATGCTTCTGCCTCTGCAAATATCAGTAGCCTTGCCTTGCAAAATGCTCCTTCTAATCCAGGTCCTCTTAAGCGCACAAGCAGTTGGTCATTCAATGAAAAGCTTCTTATACAATCTCTTTACAAGGTCCTTAGTTATGTGTCAAAAACTTACCCCATCGTGTTGTACCTGCGGGATGTTGATAAGTTGCTAAATAGATCACAAAGGACTTACAAGTTGTTACAAAAAATGCTGGAGAAACTATGTGGACCAGTTTTAATTCTCGGTTCACGAGTTCTGGATTCTGTTAATGACTACAATGAGGTAGACGAGAAACTTGCTTCAGTCTTCCCTTACAACATCAAAATTAGACCTCCAGATGATGAATCGCATCCTGTCAGCTGGAAAACTCAACTTGAAGAGGATATGAAAAAGATACAGGTTCAGGATAACAAAAATCATATTTTGGAAGTACTTGCTGCCAATGATCTTGAGTGCGATGATCTAGATTCCATCTGTGTGGCAGACACAATGGTTCTCAGCAATTACATAGAAGAGATTGTTGTGTCAGCAATTTCTTATCATTTAATGAAAAACAAAGACCCAGAGTACAGAAATGGGAAACTTGTTATTTCATGCAATAGTTTATCCCGAGCGTTGGGTATATTCCAAGACGGAAAATCCAATGGAAGAGATACATCAAAATTGGAAGCTCAAGATGTGAAATCTGAGAAGGAAATAAGGGAAGGTGCTGCTGTGAAGCCTGAAGCAAAGTCTGAAAATGGTGCTCCAGAAAAGAAAACTGAAGGAGCAGCGAGAGCTTCAGTGGCAAAGGCTGATAATGCAACTTCAGTTCCTCCAGAACCCAAAGTCGTTGAACCTCCTCCAGATAATGAGTTTGAGAAGCGCATAAGGGCAGAGGTAATACCAGCAAATGAGATTAATGTGACATTTTCTGATATTGGTGCCTTAGAAGAGACAAAAGAATCCCTTCAAGAACTGGTGATGCTTCCACTACGAAGGCCGGACCTTTTCACCGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTGTTTGGTCCTCCTGGCACAGGGAAGACAATGCTGGCTAAGGCCATTGCAAGGGAGGCTGGAGCGAGCTTCATCAATGTATCCATGTCTACCATAACTTCCAAATGGTTCGGTGAAGATGAAAAGAATGTTCGAGCTTTGTTCACACTGGCAGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTCGATAGCATGCTTGGCCAACGCACAAGAGTTGGAGAGCATGAAGCCATGAGAAAAATAAAGAATGAATTCATGGCTCATTGGGATGGCCTTATGACAAAACCAGATCAGCGCATCCTTGTTCTTGCTGCAACCAACAGGCCCTTTGATCTAGATGAAGCCATTATCAGGCGATTCGAAAGAAGAATTATGGTAGGGCTTCCATCTGCAGAAAACAGGGAAAAGATTTTGAGGACTCTTTTGTCTAAAGAAAAGGTAGACGATCAAGTTGACTTTAAGGAGCTAGCAACTATGACAGAAGGATATACTGGAAGTGATTTGAAGAATCTATGCACAACTACTGCTTATCGGCCTGTTAGAGAGTTAATTCAGCAGGAGAGACTGAAGACTCTGAAGAAGAAGCAGAAAGCTGCTAATAAAGATGTACAAGACAGACATAGAGAACAATCTACAACGGAAGATGCCCCAGATGCTGTGAATGCACAAGAGGAAGTTGAACAGGAAAGAGTTATTGTCCTTAGGCCATTGAACATGCAGGACTTCAGAGAGGCCAAAAATCAGGTTGCTGCAAGCTTTGCAGCTGAGGGAGCAGGAATGAGTGAGTTGAAGCAGTGGAATGACTTATATGGTGAAGGTGGTTCAAGAAAGAAACAGCAATTAAGTTACTTCCTATGA 2556 0.4257 MEQKGLLISALSVGVGVGVGIGLASGQSVSKWGANTGSSNALTAEKIEQEMLRLVVDGRETKVTFDQFPYYLSEQTRVLLTSAAYVHLKHAEVSKFTRNLSPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQSRYGSGNKESVFKRSTSESTLERLSGLFESFSIFPQKGEPKGKIIRQSSGVDLRSMGTDASCNAPKIRRNASASANISSLALQNAPSNPGPLKRTSSWSFNEKLLIQSLYKVLSYVSKTYPIVLYLRDVDKLLNRSQRTYKLLQKMLEKLCGPVLILGSRVLDSVNDYNEVDEKLASVFPYNIKIRPPDDESHPVSWKTQLEEDMKKIQVQDNKNHILEVLAANDLECDDLDSICVADTMVLSNYIEEIVVSAISYHLMKNKDPEYRNGKLVISCNSLSRALGIFQDGKSNGRDTSKLEAQDVKSEKEIREGAAVKPEAKSENGAPEKKTEGAARASVAKADNATSVPPEPKVVEPPPDNEFEKRIRAEVIPANEINVTFSDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLMTKPDQRILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREKILRTLLSKEKVDDQVDFKELATMTEGYTGSDLKNLCTTTAYRPVRELIQQERLKTLKKKQKAANKDVQDRHREQSTTEDAPDAVNAQEEVEQERVIVLRPLNMQDFREAKNQVAASFAAEGAGMSELKQWNDLYGEGGSRKKQQLSYFL 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0841 851 Gene3D - 695 779 - -
Prci5g0841 851 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 46 850 - -
Prci5g0841 851 ProSitePatterns AAA-protein family signature. 666 685 IPR003960 GO:0005524|GO:0016887
Prci5g0841 851 MobiDBLite consensus disorder prediction 759 791 - -
Prci5g0841 851 Pfam ATPase family associated with various cellular activities (AAA) 563 693 IPR003959 GO:0005524|GO:0016887
Prci5g0841 851 MobiDBLite consensus disorder prediction 759 780 - -
Prci5g0841 851 MobiDBLite consensus disorder prediction 434 505 - -
Prci5g0841 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 349 IPR027417 -
Prci5g0841 851 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 522 697 - -
Prci5g0841 851 Gene3D - 46 353 IPR027417 -
Prci5g0841 851 Gene3D - 522 783 IPR027417 -
Prci5g0841 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 761 IPR027417 -
Prci5g0841 851 SMART AAA_5 559 696 IPR003593 GO:0016887
Prci5g0841 851 Pfam AAA+ lid domain 717 756 IPR041569 -
Prci5g0841 851 MobiDBLite consensus disorder prediction 437 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0841 Prci-Chr5 23224739 23231400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0841 523 755 Calmodulin-binding Proteins AT3G56690 37.712 1.28e-41 162