Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0820 ATGATAATTCCCGAGAAGAACCGTCGAGAGATATGCAAATACCTCTTCAAAGAGGGAGTTTGCTATGCGAAGAAGGACTTCAATATGCCAAAACATCCTGAGATTGATGTACCGAATCTACAGGTGATTAAGTTGATGCAGAGCTTCAAGTCGAAGGAGTATGTCCGCGAGACCTTCGCTTGGATGCACTATTACTGGTATCTCACCAATGATGGCATCGAGTTCCTTAGAACCTACCTCAATCTCCCTTCTGAGATCGTCCCGGCTACTTTGAAGAAACAAGCTAAGCCTGTTGGTAGGCCTTTCGGCGGCCCACCTGGCGATCGCCCTAGGGGTCCACCTAGATTCGAAGGAGAACGGAGATTTGGTGACCGTGATGGCTACCGTGGAGGTCCCCGAGGTCCTGGTGGTGACTTTGGTGACAAGGGTGGTGCACCTGCTGATTACAGACCCTCTTTTGGGGGTTCTGGTGGGAGAACTAGTTTTGGACGTGGTGCTGGAGGTTACGGAGCTCCAAATAGTTCAGATCTTTCCTAA 537 0.4991 MIIPEKNRREICKYLFKEGVCYAKKDFNMPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPVGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGSGGRTSFGRGAGGYGAPNSSDLS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0820 178 MobiDBLite consensus disorder prediction 112 128 - -
Prci5g0820 178 Pfam Plectin/S10 domain 3 94 IPR005326 -
Prci5g0820 178 MobiDBLite consensus disorder prediction 93 178 - -
Prci5g0820 178 FunFam 40S ribosomal protein S10 1 104 - -
Prci5g0820 178 Gene3D - 1 104 IPR036388 -
Prci5g0820 178 PANTHER 40S RIBOSOMAL PROTEIN S10 1 174 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0820 Prci-Chr5 21714868 21717017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0820 1 177 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.843 8.98e-77 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0820 K02947 K09422 mnt:21406970 224.942